C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC61, gamma subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166950 Sec61g-201 ENSMUSG00000078974 10090 - 11:16501638-16508484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166950 11.837±1.91 2.715±0.56 59.648±11.49 42.423±19.95 12.059±9.27 6.582±0.96 14.804±0.77 13.596±3.75 69.398±66.45 9.603±1.44 48.945±5.58 14.169±13.76 80.027±34.52 22.169±2.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LU CIL_0006LU_0002 CGP 11:16257724-16508484
CIL_000647 CIL_000647_0002 CGP 11:16500530-16918158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006605 IEA protein targeting
GO:0015450 IEA P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0071806 IEA protein transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000352861 SEC61G-201 protein_coding Homo_sapiens 0 296
ENST00000395535 SEC61G-002 protein_coding Homo_sapiens 0 296
ENST00000415949 SEC61G-001 protein_coding Homo_sapiens 0 296
ENST00000450622 SEC61G-005 protein_coding Homo_sapiens 0 296
ENST00000460484 SEC61G-003 retained_intron Homo_sapiens 0 285
ENST00000480303 SEC61G-004 retained_intron Homo_sapiens 0 285

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