C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 45, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076224 Slc45a4-002 ENSMUSG00000079020 10090 - 15:73580290-73617324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076224 8.920±1.04 9.786±2.76 8.859±0.16 4.336±0.23 8.218±2.07 8.276±0.94 4.329±0.48 9.765±0.70 2.632±0.92 9.674±0.62 4.905±1.77 12.755±3.21 28.111±24.11 11.686±4.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WG CIL_0007WG_0002 VISTA 15:73439611-74047146
CIL_0000X9 CIL_0000X9_0003 CGP 15:73512560-73645762
CIL_0006FO CIL_0006FO_0003 CGP 15:73577424-73707505

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000008336 SLC45A4 (1 of 2)-201 protein_coding Danio_rerio 0 375
ENST00000024061 SLC45A4-001 protein_coding Homo_sapiens 0 1376
ENST00000517878 SLC45A4-003 protein_coding Homo_sapiens 0 1384
ENST00000519067 SLC45A4-002 protein_coding Homo_sapiens 0 1395
ENST00000519986 SLC45A4-004 protein_coding Homo_sapiens 0 340
ENST00000520137 SLC45A4-005 protein_coding Homo_sapiens 0 669
ENST00000521804 SLC45A4-006 processed_transcript Homo_sapiens 0 407

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