C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Hoxa transcript antisense RNA, myeloid-specific 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087658 Hotairm1 10090 + 6:52156902-52162119 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000129546 Hotairm1-003 52156902-52158528 antisense
  ENSMUST00000132559 Hotairm1-001 52158432-52162119 antisense
  ENSMUST00000159006 Hotairm1-002 52158524-52162020 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129546ENSMUST00000132559ENSMUST00000159006
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129546 N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A 0.148±0.00
ENSMUST00000132559 0.957±0.00 3.147±1.54 0.443±0.02 0.219±0.14 0.231±0.00 0.127±0.05 1.672±0.43 0.243±0.12 0.877±0.00 0.155±0.05 0.881±0.26 1.076±0.61 0.158±0.09
ENSMUST00000159006 11.192±0.00 11.973±0.00 N/A 4.641±0.00 N/A 1.063±0.00 9.798±1.47 0.500±0.23 13.486±0.00 1.870±0.93 10.230±0.00 31.593±18.29 1.313±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008JP CIL_0008JP_0002 VISTA 6:51557235-52158614
CIL_0008V2 CIL_0008V2_0002 VISTA 6:51578612-52179694
CIL_0003PD CIL_0003PD_0002 CGP 6:51859166-52158317
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003PE CIL_0003PE_0002 CGP 6:52155590-52164831

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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