C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi-repeat-containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044789 Srpx-001 ENSMUSG00000090084 10090 - X:10037977-10117682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000044789
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000044789 5.979±2.70 1.049±0.05 4.178±0.83 16.833±3.50 2.828±0.67 0.666±0.20 1.526±0.32 0.092±0.01 5.737±0.43 0.234±0.03 3.966±1.19 2.408±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z7 CIL_0005Z7_0002 CGP X:9885622-10117709
CIL_0005YZ CIL_0005YZ_0002 CGP X:10037977-10216920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001845 IMP phagolysosome assembly
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005783 IDA endoplasmic reticulum
GO:0006914 IMP autophagy
GO:0034976 IMP response to endoplasmic reticulum stress
GO:0060244 IDA negative regulation of cell proliferation involved in contact inhibition
GO:2001241 IMP positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378533 SRPX-003 protein_coding Homo_sapiens 0 1760
ENST00000432886 SRPX-201 protein_coding Homo_sapiens 0 1116
ENST00000479015 SRPX-001 processed_transcript Homo_sapiens 0 278
ENST00000538295 SRPX-202 protein_coding Homo_sapiens 0 1354
ENST00000544439 SRPX-203 protein_coding Homo_sapiens 0 1613

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