C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi-repeat-containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115543 Srpx-003 ENSMUSG00000090084 10090 - X:10038907-10117605 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverMuscleENSMUST00000115543
Transcript ID Adipose Liver Muscle
ENSMUST00000115543 3.152±0.00 0.109±0.02 0.597±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z7 CIL_0005Z7_0002 CGP X:9885622-10117709
CIL_0005YZ CIL_0005YZ_0002 CGP X:10037977-10216920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001845 IMP phagolysosome assembly
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005783 IDA endoplasmic reticulum
GO:0006914 IMP autophagy
GO:0034976 IMP response to endoplasmic reticulum stress
GO:0060244 IDA negative regulation of cell proliferation involved in contact inhibition
GO:2001241 IMP positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378533 SRPX-003 protein_coding Homo_sapiens 0 1286
ENST00000432886 SRPX-201 protein_coding Homo_sapiens 0 1029
ENST00000479015 SRPX-001 processed_transcript Homo_sapiens 0 278
ENST00000538295 SRPX-202 protein_coding Homo_sapiens 0 959
ENST00000544439 SRPX-203 protein_coding Homo_sapiens 0 1286

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