C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 189
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006587 Tmem189-001 ENSMUSG00000090213 10090 - 2:167642608-167661556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006587
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006587 46.600±11.65 18.425±2.89 11.923±1.27 56.425±28.48 78.183±18.09 14.511±2.61 145.198±29.00 13.094±2.52 59.198±16.88 10.052±2.81 43.829±22.08 34.625±9.67 40.055±6.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_0007ZW CIL_0007ZW_0002 VISTA 2:167542374-168145654
CIL_0001PF CIL_0001PF_0002 CGP 2:167607638-167661496
CIL_00079R CIL_00079R_0002 CGP 2:167607850-167689822
CIL_0007H0 CIL_0007H0_0002 CGP 2:167642608-167690418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341698 TMEM189-UBE2V1-001 protein_coding Homo_sapiens 0 832
ENST00000371650 TMEM189-002 protein_coding Homo_sapiens 0 1081
ENST00000371652 TMEM189-001 protein_coding Homo_sapiens 0 1133
ENST00000371656 TMEM189-004 protein_coding Homo_sapiens 0 830
ENST00000371658 TMEM189-006 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000453505 TMEM189-003 nonsense_mediated_decay Homo_sapiens 0 983

Loading