C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000006_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064270-ENSG00000140950 CGP 9606 16:84368527-84554033
GeneTranscriptPositionBiotype
ENSG00000064270 (ATP2C2)
ATPase, Ca++ transporting, type 2C, member 2 		ENST00000262429 (ATP2C2-001) 84368527-84464178 protein_coding
ENST00000416219 (ATP2C2-002) 84368527-84464187 protein_coding
ENST00000420010 (ATP2C2-004) 84406588-84464000 processed_transcript
ENST00000563340 (ATP2C2-011) 84422427-84426051 retained_intron
ENST00000564099 (ATP2C2-012) 84439039-84440892 retained_intron
ENST00000565546 (ATP2C2-007) 84406588-84422534 processed_transcript
ENST00000565631 (ATP2C2-003) 84404427-84464000 retained_intron
ENST00000565927 (ATP2C2-008) 84406612-84415526 processed_transcript
ENST00000566874 (ATP2C2-015) 84460763-84461602 retained_intron
ENST00000567222 (ATP2C2-005) 84459606-84464179 retained_intron
ENST00000567629 (ATP2C2-014) 84460694-84462086 retained_intron
ENST00000567892 (ATP2C2-013) 84453236-84463730 retained_intron
ENST00000568160 (ATP2C2-010) 84408438-84410907 retained_intron
ENST00000569207 (ATP2C2-009) 84405220-84422398 nonsense_mediated_decay
ENST00000624933 (ATP2C2-006) 84460288-84461778 TEC
ENSG00000140950 (TLDC1)
TBC/LysM-associated domain containing 1 		ENST00000343629 (TLDC1-001) 84476421-84504758 protein_coding
ENST00000561807 (TLDC1-006) 84489352-84504656 processed_transcript
ENST00000562447 (TLDC1-009) 84495818-84504621 protein_coding
ENST00000565079 (TLDC1-007) 84489363-84554033 protein_coding
ENST00000565701 (TLDC1-010) 84497704-84504629 retained_intron
ENST00000565765 (TLDC1-008) 84497951-84504659 protein_coding
ENST00000566995 (TLDC1-003) 84479697-84504647 nonsense_mediated_decay
ENST00000567321 (TLDC1-004) 84486004-84488436 retained_intron
ENST00000570036 (TLDC1-002) 84479791-84504690 nonsense_mediated_decay
ENSG00000261286 (RP11-517C16.2)
 ENST00000565700 (RP11-517C16.2-001) 84459259-84467361 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_000006_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034112-ENSMUSG00000034105 CGP 10090 8:119700009-119778416
GeneTranscriptPositionBiotype
ENSMUSG00000034105 (Tldc1)
TBC/LysM associated domain containing 1 		ENSMUST00000049156 (Tldc1-201) 119760587-119778416 protein_coding
ENSMUSG00000034112 (Atp2c2)
ATPase, Ca++ transporting, type 2C, member 2 		ENSMUST00000095171 (Atp2c2-201) 119700009-119757718 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000006_0001ENSG00000064270ENST00000262429ENST00000416219ENST00000420010ENST00000563340ENST00000564099ENST00000565546ENST00000565631ENST00000565927ENST00000566874ENST00000567222ENST00000567629ENST00000567892ENST00000568160ENST00000569207ENST00000624933ENSG00000140950ENST00000343629ENST00000561807ENST00000562447ENST00000565079ENST00000565701ENST00000565765ENST00000566995ENST00000567321ENST00000570036ENSG00000261286ENST00000565700CIL_000006_0002ENSMUSG00000034105ENSMUST00000049156ENSMUSG00000034112ENSMUST00000095171
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000006_0001ENSG00000064270ENST00000262429ENST00000416219ENST00000420010ENST00000565546ENST00000565631ENST00000565927ENST00000567222ENST00000567892ENST00000568160ENST00000624933ENSG00000140950ENST00000343629ENST00000561807ENST00000566995ENST00000567321ENST00000570036ENSG00000261286ENST00000565700CIL_000006_0002ENSMUSG00000034105ENSMUST00000049156ENSMUSG00000034112ENSMUST00000095171
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064270 ENST00000262429 N/A N/A 0.086±0.00 N/A 0.485±0.00 1.216±0.64 N/A 0.268±0.00 N/A 3.667±1.94 N/A 1.199±0.25 0.663±0.00 N/A
ENST00000416219 N/A N/A N/A N/A N/A N/A N/A 0.370±0.00 N/A N/A N/A 3.380±2.80 N/A 0.213±0.00
ENST00000420010 0.067±0.00 N/A N/A N/A N/A 1.092±0.54 N/A N/A N/A N/A N/A 1.845±1.04 0.302±0.00 0.090±0.00
ENST00000563340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565546 N/A N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 N/A N/A N/A N/A N/A
ENST00000565631 N/A N/A N/A N/A N/A 1.419±0.00 N/A N/A 0.056±0.00 N/A N/A 1.076±0.00 N/A N/A
ENST00000565927 N/A N/A N/A N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000566874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567222 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A 0.107±0.00 N/A 0.035±0.00 N/A
ENST00000567629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567892 N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000568160 N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624933 N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A
ENSG00000140950 ENST00000343629 N/A 0.950±0.00 N/A 0.615±0.31 0.643±0.00 0.523±0.00 0.198±0.00 0.118±0.00 N/A N/A N/A 1.860±0.39 3.569±1.41 1.182±0.00
ENST00000561807 N/A N/A 0.970±0.00 2.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566995 0.684±0.00 N/A N/A 0.648±0.00 N/A N/A 0.334±0.19 N/A N/A 0.806±0.00 0.721±0.00 1.282±0.00 3.508±0.00 1.188±0.11
ENST00000567321 N/A N/A N/A 0.315±0.00 N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570036 0.516±0.00 1.153±0.00 N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A 1.471±0.00 N/A 1.249±0.00
ENSG00000261286 ENST00000565700 0.122±0.00 0.522±0.00 0.069±0.00 0.270±0.09 0.202±0.00 1.316±0.00 0.045±0.00 0.561±0.00 0.007±0.00 2.375±0.00 N/A 1.704±0.74 0.152±0.13 0.292±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034105 ENSMUST00000049156 3.343±1.45 7.291±1.08 N/A 1.818±0.85 2.951±1.48 7.296±1.02 4.115±2.00 3.191±2.25 2.354±1.28 4.585±1.47 1.049±0.45 7.270±2.72 2.292±1.42 2.468±0.65
ENSMUSG00000034112 ENSMUST00000095171 0.236±0.24 0.015±0.00 0.960±0.14 0.522±0.67 1.064±0.36 33.713±5.67 0.219±0.15 0.173±0.08 0.052±0.04 2.839±1.00 0.029±0.01 1.892±0.56 2.897±2.13 0.792±0.17

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