C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5766
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161633 Gm5766-001 ENSMUSG00000089645 10090 + 16:4230301-4231099 transcribed_processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastLiverOvaryPlacentaENSMUST00000161633
Transcript ID Adipose Adrenal Bladder Breast Liver Ovary Placenta
ENSMUST00000161633 0.045±0.00 0.100±0.00 0.060±0.00 0.074±0.00 0.010±0.00 0.057±0.00 0.081±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000C CIL_00000C_0003 CGP 16:4081328-4420498

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 640
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 579
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 599
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 667
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 715
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 309
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 588
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 422

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