C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164073-ENSG00000164074 CGP 9606 4:127917805-128039711
GeneTranscriptPositionBiotype
ENSG00000164073 (MFSD8)
major facilitator superfamily domain containing 8 		ENST00000296468 (MFSD8-001) 127917805-127965949 protein_coding
ENST00000503928 (MFSD8-008) 127918152-127920599 processed_transcript
ENST00000504126 (MFSD8-007) 127921357-127921989 retained_intron
ENST00000505284 (MFSD8-005) 127921731-127965142 processed_transcript
ENST00000508441 (MFSD8-006) 127938783-127965145 processed_transcript
ENST00000509826 (MFSD8-004) 127921862-127965938 nonsense_mediated_decay
ENST00000513559 (MFSD8-003) 127920342-127965963 protein_coding
ENST00000515130 (MFSD8-002) 127919206-127965995 processed_transcript
ENSG00000164074 (C4orf29)
chromosome 4 open reading frame 29 		ENST00000388795 (C4orf29-002) 127965411-128039711 protein_coding
ENST00000398965 (C4orf29-201) 127965306-128031290 protein_coding
ENST00000444616 (C4orf29-001) 127965377-128031313 protein_coding
ENST00000473040 (C4orf29-004) 127965315-128036286 nonsense_mediated_decay
ENST00000513371 (C4orf29-005) 127965474-128008957 protein_coding
ENST00000611882 (C4orf29-202) 127965506-128030805 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00001O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025759-ENSMUSG00000037818 CGP 10090 3:40818070-40938138
GeneTranscriptPositionBiotype
ENSMUSG00000025759 (Mfsd8)
major facilitator superfamily domain containing 8 		ENSMUST00000026859 (Mfsd8-001) 40818070-40846885 protein_coding
ENSMUST00000137533 (Mfsd8-002) 40826933-40846694 nonsense_mediated_decay
ENSMUSG00000037818 (3110057O12Rik)
RIKEN cDNA 3110057O12 gene 		ENSMUST00000060415 (3110057O12Rik-007) 40894263-40917098 protein_coding
ENSMUST00000108077 (3110057O12Rik-201) 40894322-40937137 protein_coding
ENSMUST00000108078 (3110057O12Rik-202) 40846970-40936307 protein_coding
ENSMUST00000159057 (3110057O12Rik-004) 40930545-40936695 processed_transcript
ENSMUST00000159227 (3110057O12Rik-002) 40894277-40938136 nonsense_mediated_decay
ENSMUST00000159274 (3110057O12Rik-005) 40894306-40923778 protein_coding
ENSMUST00000159421 (3110057O12Rik-006) 40894345-40917406 protein_coding
ENSMUST00000159774 (3110057O12Rik-001) 40894145-40938138 protein_coding
ENSMUST00000161111 (3110057O12Rik-003) 40894324-40937154 nonsense_mediated_decay
ENSMUSG00000074619 (1700034I23Rik)
RIKEN cDNA 1700034I23 gene 		ENSMUST00000099123 (1700034I23Rik-001) 40900196-40902543 protein_coding
ENSMUSG00000074620 (Gm10731)
predicted gene 10731 		ENSMUST00000181171 (Gm10731-001) 40854676-40855123 processed_pseudogene
ENSMUSG00000097583 (6430590A07Rik)
RIKEN cDNA 6430590A07 gene 		ENSMUST00000181813 (6430590A07Rik-201) 40885897-40894123 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001O_0001ENSG00000164073ENST00000296468ENST00000503928ENST00000504126ENST00000505284ENST00000508441ENST00000509826ENST00000513559ENST00000515130ENSG00000164074ENST00000388795ENST00000398965ENST00000444616ENST00000473040ENST00000513371ENST00000611882CIL_00001O_0002ENSMUSG00000025759ENSMUST00000026859ENSMUST00000137533ENSMUSG00000037818ENSMUST00000060415ENSMUST00000108077ENSMUST00000108078ENSMUST00000159057ENSMUST00000159227ENSMUST00000159274ENSMUST00000159421ENSMUST00000159774ENSMUST00000161111ENSMUSG00000074619ENSMUST00000099123ENSMUSG00000074620ENSMUST00000181171ENSMUSG00000097583ENSMUST00000181813
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001O_0001ENSG00000164073ENST00000296468ENST00000503928ENST00000505284ENST00000513559ENSG00000164074ENST00000388795ENST00000398965ENST00000473040ENST00000611882CIL_00001O_0002ENSMUSG00000025759ENSMUST00000026859ENSMUST00000137533ENSMUSG00000037818ENSMUST00000060415ENSMUST00000108077ENSMUST00000108078ENSMUST00000159057ENSMUST00000159227ENSMUST00000159421ENSMUST00000159774ENSMUST00000161111ENSMUSG00000074619ENSMUST00000099123ENSMUSG00000074620ENSMUST00000181171ENSMUSG00000097583ENSMUST00000181813
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164073 ENST00000296468 N/A 1.563±0.00 N/A 1.616±0.00 1.336±0.48 0.650±0.00 0.720±0.00 2.325±0.00 1.499±0.00 2.185±0.00 N/A 1.278±0.29 0.536±0.00 1.504±0.00
ENST00000503928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.414±0.00
ENST00000504126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.141±0.00 N/A
ENST00000508441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513559 N/A N/A 1.181±0.00 2.717±0.00 2.269±0.00 3.266±0.00 N/A N/A 1.791±0.01 4.026±0.00 N/A 2.299±0.00 1.573±0.20 N/A
ENST00000515130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164074 ENST00000388795 N/A N/A N/A 0.461±0.00 1.009±0.00 N/A 1.521±0.66 1.505±0.00 N/A N/A 0.631±0.34 N/A N/A N/A
ENST00000398965 N/A N/A N/A N/A N/A 2.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473040 N/A N/A 0.868±0.00 N/A 1.713±0.00 N/A N/A 3.239±0.00 1.203±0.00 2.987±0.00 N/A 1.714±0.42 N/A N/A
ENST00000513371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611882 N/A 2.457±0.00 1.090±0.00 N/A N/A 3.197±0.00 N/A N/A 2.856±0.00 N/A 1.861±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025759 ENSMUST00000026859 6.031±2.44 2.238±0.26 2.625±0.31 3.127±1.42 4.104±1.64 0.923±0.43 2.043±0.31 1.393±0.38 1.798±0.41 1.919±0.62 3.279±0.69 1.659±0.92 1.454±0.89 0.679±0.30
ENSMUST00000137533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.03 1.759±0.00 N/A
ENSMUSG00000037818 ENSMUST00000060415 N/A N/A N/A N/A 2.661±0.72 1.738±0.00 N/A N/A N/A 1.647±0.00 N/A 0.648±0.17 N/A N/A
ENSMUST00000108077 N/A N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A N/A 0.520±0.12 N/A 0.500±0.00 N/A
ENSMUST00000108078 0.539±0.09 0.243±0.00 N/A 0.505±0.00 0.702±0.02 0.636±0.00 4.363±0.80 N/A 1.362±0.49 0.423±0.00 0.902±0.27 0.629±0.40 1.345±0.67 2.190±0.61
ENSMUST00000159057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.426±0.00 N/A
ENSMUST00000159227 N/A N/A 0.442±0.00 N/A 0.746±0.14 0.590±0.04 N/A N/A N/A N/A 0.201±0.00 0.360±0.08 N/A 0.574±0.13
ENSMUST00000159274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.099±0.39 N/A N/A
ENSMUST00000159774 0.205±0.00 0.443±0.15 1.130±0.07 2.879±0.12 N/A 0.569±0.23 N/A 1.015±0.00 1.129±0.40 0.547±0.00 0.239±0.00 0.662±0.25 N/A 0.845±0.00
ENSMUST00000161111 N/A N/A N/A 0.631±0.00 N/A 0.589±0.00 N/A N/A N/A 0.511±0.00 N/A N/A N/A 0.624±0.09
ENSMUSG00000074619 ENSMUST00000099123 0.063±0.05 0.056±0.00 0.076±0.00 0.094±0.02 0.105±0.09 0.053±0.00 0.083±0.03 0.055±0.05 0.033±0.03 0.045±0.02 0.077±0.02 0.067±0.05 0.037±0.02 71.765±31.45
ENSMUSG00000074620 ENSMUST00000181171 N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097583 ENSMUST00000181813 0.659±0.17 0.624±0.39 0.475±0.00 2.091±0.00 0.597±0.41 0.476±0.23 0.458±0.09 0.498±0.25 0.299±0.10 0.336±0.22 0.174±0.10 0.444±0.25 0.390±0.16 0.765±0.26

Loading