C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164073-ENSG00000164074 CGP 9606 4:127917805-128039711
GeneTranscriptPositionBiotype
ENSG00000164073 (MFSD8)
major facilitator superfamily domain containing 8 		ENST00000296468 (MFSD8-001) 127917805-127965949 protein_coding
ENST00000503928 (MFSD8-008) 127918152-127920599 processed_transcript
ENST00000504126 (MFSD8-007) 127921357-127921989 retained_intron
ENST00000505284 (MFSD8-005) 127921731-127965142 processed_transcript
ENST00000508441 (MFSD8-006) 127938783-127965145 processed_transcript
ENST00000509826 (MFSD8-004) 127921862-127965938 nonsense_mediated_decay
ENST00000513559 (MFSD8-003) 127920342-127965963 protein_coding
ENST00000515130 (MFSD8-002) 127919206-127965995 processed_transcript
ENSG00000164074 (C4orf29)
chromosome 4 open reading frame 29 		ENST00000388795 (C4orf29-002) 127965411-128039711 protein_coding
ENST00000398965 (C4orf29-201) 127965306-128031290 protein_coding
ENST00000444616 (C4orf29-001) 127965377-128031313 protein_coding
ENST00000473040 (C4orf29-004) 127965315-128036286 nonsense_mediated_decay
ENST00000513371 (C4orf29-005) 127965474-128008957 protein_coding
ENST00000611882 (C4orf29-202) 127965506-128030805 protein_coding
CIL_00001O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025759-ENSMUSG00000037818 CGP 10090 3:40818070-40938138
GeneTranscriptPositionBiotype
ENSMUSG00000025759 (Mfsd8)
major facilitator superfamily domain containing 8 		ENSMUST00000026859 (Mfsd8-001) 40818070-40846885 protein_coding
ENSMUST00000137533 (Mfsd8-002) 40826933-40846694 nonsense_mediated_decay
ENSMUSG00000037818 (3110057O12Rik)
RIKEN cDNA 3110057O12 gene 		ENSMUST00000060415 (3110057O12Rik-007) 40894263-40917098 protein_coding
ENSMUST00000108077 (3110057O12Rik-201) 40894322-40937137 protein_coding
ENSMUST00000108078 (3110057O12Rik-202) 40846970-40936307 protein_coding
ENSMUST00000159057 (3110057O12Rik-004) 40930545-40936695 processed_transcript
ENSMUST00000159227 (3110057O12Rik-002) 40894277-40938136 nonsense_mediated_decay
ENSMUST00000159274 (3110057O12Rik-005) 40894306-40923778 protein_coding
ENSMUST00000159421 (3110057O12Rik-006) 40894345-40917406 protein_coding
ENSMUST00000159774 (3110057O12Rik-001) 40894145-40938138 protein_coding
ENSMUST00000161111 (3110057O12Rik-003) 40894324-40937154 nonsense_mediated_decay
ENSMUSG00000074619 (1700034I23Rik)
RIKEN cDNA 1700034I23 gene 		ENSMUST00000099123 (1700034I23Rik-001) 40900196-40902543 protein_coding
ENSMUSG00000074620 (Gm10731)
predicted gene 10731 		ENSMUST00000181171 (Gm10731-001) 40854676-40855123 processed_pseudogene
ENSMUSG00000097583 (6430590A07Rik)
RIKEN cDNA 6430590A07 gene 		ENSMUST00000181813 (6430590A07Rik-201) 40885897-40894123 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001O_0001ENSG00000164073ENST00000296468ENST00000503928ENST00000504126ENST00000505284ENST00000508441ENST00000509826ENST00000513559ENST00000515130ENSG00000164074ENST00000388795ENST00000398965ENST00000444616ENST00000473040ENST00000513371ENST00000611882CIL_00001O_0002ENSMUSG00000025759ENSMUST00000026859ENSMUST00000137533ENSMUSG00000037818ENSMUST00000060415ENSMUST00000108077ENSMUST00000108078ENSMUST00000159057ENSMUST00000159227ENSMUST00000159274ENSMUST00000159421ENSMUST00000159774ENSMUST00000161111ENSMUSG00000074619ENSMUST00000099123ENSMUSG00000074620ENSMUST00000181171ENSMUSG00000097583ENSMUST00000181813
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001O_0001ENSG00000164073ENST00000296468ENST00000503928ENST00000505284ENST00000513559ENSG00000164074ENST00000388795ENST00000398965ENST00000473040ENST00000611882CIL_00001O_0002ENSMUSG00000025759ENSMUST00000026859ENSMUST00000137533ENSMUSG00000037818ENSMUST00000060415ENSMUST00000108077ENSMUST00000108078ENSMUST00000159057ENSMUST00000159227ENSMUST00000159421ENSMUST00000159774ENSMUST00000161111ENSMUSG00000074619ENSMUST00000099123ENSMUSG00000074620ENSMUST00000181171ENSMUSG00000097583ENSMUST00000181813
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164073 ENST00000296468 N/A 1.563±0.00 N/A 1.616±0.00 1.336±0.48 0.650±0.00 0.720±0.00 2.325±0.00 1.499±0.00 2.185±0.00 N/A 1.278±0.29 0.536±0.00 1.504±0.00
ENST00000503928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.414±0.00
ENST00000504126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.141±0.00 N/A
ENST00000508441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513559 N/A N/A 1.181±0.00 2.717±0.00 2.269±0.00 3.266±0.00 N/A N/A 1.791±0.01 4.026±0.00 N/A 2.299±0.00 1.573±0.20 N/A
ENST00000515130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164074 ENST00000388795 N/A N/A N/A 0.461±0.00 1.009±0.00 N/A 1.521±0.66 1.505±0.00 N/A N/A 0.631±0.34 N/A N/A N/A
ENST00000398965 N/A N/A N/A N/A N/A 2.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473040 N/A N/A 0.868±0.00 N/A 1.713±0.00 N/A N/A 3.239±0.00 1.203±0.00 2.987±0.00 N/A 1.714±0.42 N/A N/A
ENST00000513371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611882 N/A 2.457±0.00 1.090±0.00 N/A N/A 3.197±0.00 N/A N/A 2.856±0.00 N/A 1.861±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025759 ENSMUST00000026859 6.031±2.44 2.238±0.26 2.625±0.31 3.127±1.42 4.104±1.64 0.923±0.43 2.043±0.31 1.393±0.38 1.798±0.41 1.919±0.62 3.279±0.69 1.659±0.92 1.454±0.89 0.679±0.30
ENSMUST00000137533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.03 1.759±0.00 N/A
ENSMUSG00000037818 ENSMUST00000060415 N/A N/A N/A N/A 2.661±0.72 1.738±0.00 N/A N/A N/A 1.647±0.00 N/A 0.648±0.17 N/A N/A
ENSMUST00000108077 N/A N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A N/A 0.520±0.12 N/A 0.500±0.00 N/A
ENSMUST00000108078 0.539±0.09 0.243±0.00 N/A 0.505±0.00 0.702±0.02 0.636±0.00 4.363±0.80 N/A 1.362±0.49 0.423±0.00 0.902±0.27 0.629±0.40 1.345±0.67 2.190±0.61
ENSMUST00000159057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.426±0.00 N/A
ENSMUST00000159227 N/A N/A 0.442±0.00 N/A 0.746±0.14 0.590±0.04 N/A N/A N/A N/A 0.201±0.00 0.360±0.08 N/A 0.574±0.13
ENSMUST00000159274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.099±0.39 N/A N/A
ENSMUST00000159774 0.205±0.00 0.443±0.15 1.130±0.07 2.879±0.12 N/A 0.569±0.23 N/A 1.015±0.00 1.129±0.40 0.547±0.00 0.239±0.00 0.662±0.25 N/A 0.845±0.00
ENSMUST00000161111 N/A N/A N/A 0.631±0.00 N/A 0.589±0.00 N/A N/A N/A 0.511±0.00 N/A N/A N/A 0.624±0.09
ENSMUSG00000074619 ENSMUST00000099123 0.063±0.05 0.056±0.00 0.076±0.00 0.094±0.02 0.105±0.09 0.053±0.00 0.083±0.03 0.055±0.05 0.033±0.03 0.045±0.02 0.077±0.02 0.067±0.05 0.037±0.02 71.765±31.45
ENSMUSG00000074620 ENSMUST00000181171 N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097583 ENSMUST00000181813 0.659±0.17 0.624±0.39 0.475±0.00 2.091±0.00 0.597±0.41 0.476±0.23 0.458±0.09 0.498±0.25 0.299±0.10 0.336±0.22 0.174±0.10 0.444±0.25 0.390±0.16 0.765±0.26

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