C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 3110057O12 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108078 3110057O12Rik-202 ENSMUSG00000037818 10090 + 3:40846970-40936307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000108078
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108078 0.539±0.09 0.243±0.00 0.505±0.00 0.702±0.02 0.636±0.00 4.363±0.80 1.362±0.49 0.423±0.00 0.902±0.27 0.629±0.40 1.345±0.67 2.190±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001O CIL_00001O_0002 CGP 3:40818070-40938138

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000388795 C4orf29-002 protein_coding Homo_sapiens 0 1373
ENST00000398965 C4orf29-201 protein_coding Homo_sapiens 0 952
ENST00000444616 C4orf29-001 protein_coding Homo_sapiens 0 952
ENST00000473040 C4orf29-004 nonsense_mediated_decay Homo_sapiens 0 1136
ENST00000513371 C4orf29-005 protein_coding Homo_sapiens 0 442
ENST00000611882 C4orf29-202 protein_coding Homo_sapiens 0 1297

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