C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 3110057O12 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159227 3110057O12Rik-002 ENSMUSG00000037818 10090 + 3:40894277-40938136 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonMuscleOvaryTestisENSMUST00000159227
Transcript ID Bladder Breast Colon Muscle Ovary Testis
ENSMUST00000159227 0.442±0.00 0.746±0.14 0.590±0.04 0.201±0.00 0.360±0.08 0.574±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001O CIL_00001O_0002 CGP 3:40818070-40938138

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000388795 C4orf29-002 protein_coding Homo_sapiens 0 824
ENST00000398965 C4orf29-201 protein_coding Homo_sapiens 0 599
ENST00000444616 C4orf29-001 protein_coding Homo_sapiens 0 599
ENST00000473040 C4orf29-004 nonsense_mediated_decay Homo_sapiens 0 824
ENST00000513371 C4orf29-005 protein_coding Homo_sapiens 0 257
ENST00000611882 C4orf29-202 protein_coding Homo_sapiens 0 747

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