C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00003J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187595-ENSG00000108771 CGP 9606 17:42025576-42112733
GeneTranscriptPositionBiotype
ENSG00000108771 (DHX58)
DEXH (Asp-Glu-X-His) box polypeptide 58 		ENST00000251642 (DHX58-001) 42101404-42112733 protein_coding
ENST00000413196 (DHX58-002) 42107693-42112486 protein_coding
ENST00000430773 (DHX58-003) 42110816-42112463 protein_coding
ENST00000586522 (DHX58-006) 42103213-42112713 retained_intron
ENST00000589979 (DHX58-012) 42101404-42104907 nonsense_mediated_decay
ENST00000590637 (DHX58-010) 42103608-42107848 retained_intron
ENST00000591220 (DHX58-009) 42110779-42112714 protein_coding
ENST00000592024 (DHX58-011) 42101600-42102809 retained_intron
ENSG00000168256 (NKIRAS2)
NFKB inhibitor interacting Ras-like 2 		ENST00000307641 (NKIRAS2-010) 42017020-42025644 protein_coding
ENST00000316082 (NKIRAS2-008) 42020123-42023940 protein_coding
ENST00000393879 (NKIRAS2-009) 42020416-42025641 retained_intron
ENST00000393880 (NKIRAS2-002) 42020097-42024774 protein_coding
ENST00000393881 (NKIRAS2-003) 42020097-42024774 protein_coding
ENST00000393885 (NKIRAS2-001) 42020051-42025058 protein_coding
ENST00000449471 (NKIRAS2-006) 42020106-42024833 protein_coding
ENST00000462043 (NKIRAS2-013) 42020101-42024026 protein_coding
ENST00000479407 (NKIRAS2-007) 42020078-42024265 protein_coding
ENST00000485789 (NKIRAS2-005) 42020078-42024265 nonsense_mediated_decay
ENST00000491638 (NKIRAS2-004) 42020104-42024220 nonsense_mediated_decay
ENST00000585955 (NKIRAS2-011) 42011382-42022444 protein_coding
ENST00000587028 (NKIRAS2-014) 42020102-42021995 retained_intron
ENST00000587337 (NKIRAS2-012) 42020072-42023841 protein_coding
ENSG00000267221 (CTD-2132N18.2)
 ENST00000587304 (CTD-2132N18.2-001) 42040713-42043117 sense_intronic
ENSG00000270010 (CTD-2132N18.4)
 ENST00000602842 (CTD-2132N18.4-001) 42038232-42038734 sense_intronic
CIL_00003J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014198-ENSMUSG00000017830 CGP 10090 11:100627543-100704271
GeneTranscriptPositionBiotype
ENSMUSG00000017830 (Dhx58)
DEXH (Asp-Glu-X-His) box polypeptide 58 		ENSMUST00000017974 (Dhx58-001) 100694884-100704271 protein_coding
ENSMUST00000126167 (Dhx58-003) 100701392-100704253 processed_transcript
ENSMUST00000132930 (Dhx58-002) 100702760-100704271 processed_transcript
ENSMUST00000140543 (Dhx58-006) 100695063-100696620 processed_transcript
ENSMUST00000149869 (Dhx58-005) 100695253-100699235 processed_transcript
ENSMUST00000150656 (Dhx58-004) 100702148-100703347 processed_transcript
ENSMUSG00000017837 (Nkiras2)
NFKB inhibitor interacting Ras-like protein 2 		ENSMUST00000017981 (Nkiras2-001) 100622876-100627607 protein_coding
ENSMUST00000051947 (Nkiras2-002) 100620284-100626416 protein_coding
ENSMUST00000107376 (Nkiras2-005) 100619244-100626799 protein_coding
ENSMUST00000127547 (Nkiras2-004) 100622920-100624878 processed_transcript
ENSMUST00000142993 (Nkiras2-003) 100623011-100626117 protein_coding
ENSMUST00000155840 (Nkiras2-006) 100622948-100626586 processed_transcript
ENSMUSG00000085604 (Dhx58os)
DEAH (Asp-Glu-Ala-His) box polypeptide 58, opposite strand 		ENSMUST00000137154 (Dhx58os-001) 100687417-100697520 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003J_0001ENSG00000108771ENST00000251642ENST00000413196ENST00000430773ENST00000586522ENST00000589979ENST00000590637ENST00000591220ENST00000592024ENSG00000168256ENST00000307641ENST00000316082ENST00000393879ENST00000393880ENST00000393881ENST00000393885ENST00000449471ENST00000462043ENST00000479407ENST00000485789ENST00000491638ENST00000585955ENST00000587028ENST00000587337ENSG00000267221ENST00000587304ENSG00000270010ENST00000602842CIL_00003J_0002ENSMUSG00000017830ENSMUST00000017974ENSMUST00000126167ENSMUST00000132930ENSMUST00000140543ENSMUST00000149869ENSMUST00000150656ENSMUSG00000017837ENSMUST00000017981ENSMUST00000051947ENSMUST00000107376ENSMUST00000127547ENSMUST00000142993ENSMUST00000155840ENSMUSG00000085604ENSMUST00000137154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003J_0001ENSG00000108771ENST00000251642ENST00000413196ENST00000586522ENST00000589979ENST00000590637ENST00000591220ENST00000592024ENSG00000168256ENST00000307641ENST00000393885ENSG00000267221ENST00000587304ENSG00000270010ENST00000602842CIL_00003J_0002ENSMUSG00000017830ENSMUST00000017974ENSMUST00000126167ENSMUST00000132930ENSMUST00000140543ENSMUST00000149869ENSMUSG00000017837ENSMUST00000017981ENSMUSG00000085604ENSMUST00000137154
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108771 ENST00000251642 3.193±0.00 3.223±0.00 N/A 1.193±0.00 1.758±0.00 N/A 0.681±0.00 2.093±0.00 0.251±0.00 3.044±0.00 N/A 2.427±0.57 3.418±0.37 2.832±0.37
ENST00000413196 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A 0.629±0.00 N/A 2.298±1.55 2.469±0.00 7.048±0.00
ENST00000430773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586522 N/A 1.074±0.00 N/A N/A N/A N/A N/A N/A N/A 0.392±0.00 N/A N/A N/A N/A
ENST00000589979 N/A N/A N/A 1.879±0.00 3.245±0.00 N/A N/A N/A 2.993±0.00 4.145±0.00 0.678±0.27 N/A N/A N/A
ENST00000590637 N/A N/A 0.358±0.00 N/A 0.906±0.00 0.642±0.00 N/A 1.242±0.00 N/A N/A N/A 1.761±0.00 N/A N/A
ENST00000591220 N/A N/A N/A N/A N/A N/A N/A 3.158±0.00 N/A N/A 1.854±0.00 N/A N/A N/A
ENST00000592024 N/A 4.650±0.00 0.185±0.00 2.264±0.00 N/A 1.099±0.00 N/A 1.543±0.00 0.811±0.00 2.372±0.00 N/A 3.847±0.00 N/A 3.354±0.00
ENSG00000168256 ENST00000307641 N/A N/A N/A N/A 15.425±0.00 N/A 12.856±0.00 N/A 9.610±0.00 10.495±0.00 8.637±3.81 26.504±0.00 N/A 24.589±0.00
ENST00000316082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393885 N/A N/A N/A N/A 6.427±0.00 N/A 4.480±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000449471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267221 ENST00000587304 0.345±0.00 0.367±0.00 N/A 0.656±0.00 0.546±0.00 0.296±0.00 0.072±0.00 0.403±0.00 N/A 0.311±0.00 N/A 0.968±0.42 0.144±0.04 0.911±0.38
ENSG00000270010 ENST00000602842 0.167±0.00 0.135±0.00 0.377±0.00 0.596±0.48 0.449±0.00 0.593±0.00 0.063±0.00 0.236±0.00 0.145±0.00 0.553±0.15 N/A 1.519±0.33 0.255±0.13 0.423±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017830 ENSMUST00000017974 5.159±1.57 10.505±3.34 2.325±0.38 0.678±0.16 4.581±1.47 3.852±0.72 0.494±0.24 1.536±0.51 4.241±2.32 3.583±0.59 0.261±0.13 3.178±1.41 1.376±0.09 11.896±4.07
ENSMUST00000126167 N/A N/A N/A 0.874±0.00 N/A N/A N/A 0.660±0.00 N/A N/A 0.349±0.00 2.426±0.00 6.233±0.18 16.626±0.00
ENSMUST00000132930 N/A N/A N/A N/A 2.063±0.00 N/A 0.451±0.00 0.520±0.00 N/A N/A 0.077±0.00 2.053±0.00 N/A N/A
ENSMUST00000140543 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A 0.161±0.00 1.384±0.00 N/A N/A
ENSMUST00000149869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.02 N/A N/A 18.044±0.00
ENSMUST00000150656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017837 ENSMUST00000017981 37.863±4.94 26.083±1.14 32.440±3.34 54.750±1.41 28.023±2.81 57.237±6.31 41.187±7.96 27.170±2.02 17.129±1.71 33.626±1.40 14.672±1.93 32.967±2.68 29.168±3.43 105.708±6.97
ENSMUST00000051947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085604 ENSMUST00000137154 N/A N/A 0.502±0.00 0.174±0.00 2.861±0.55 N/A N/A 0.428±0.10 N/A N/A 0.059±0.03 N/A N/A N/A

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