C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00003X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198471-ENSG00000113916 CGP 9606 3:187698259-187745727
GeneTranscriptPositionBiotype
ENSG00000113916 (BCL6)
B-cell CLL/lymphoma 6 		ENST00000232014 (BCL6-004) 187722398-187736569 protein_coding
ENST00000406870 (BCL6-001) 187721377-187745727 protein_coding
ENST00000419510 (BCL6-003) 187721387-187737088 nonsense_mediated_decay
ENST00000430339 (BCL6-008) 187731727-187734947 protein_coding
ENST00000438077 (BCL6-007) 187731780-187737944 protein_coding
ENST00000450123 (BCL6-010) 187722432-187734882 protein_coding
ENST00000470319 (BCL6-005) 187734445-187745472 retained_intron
ENST00000479110 (BCL6-011) 187724569-187725623 retained_intron
ENST00000480458 (BCL6-009) 187731765-187745437 processed_transcript
ENST00000496823 (BCL6-006) 187736187-187745459 processed_transcript
ENST00000621333 (BCL6-201) 187721377-187745725 protein_coding
CIL_00003X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047531-ENSMUSG00000022508 CGP 10090 16:23925548-23988852
GeneTranscriptPositionBiotype
ENSMUSG00000022508 (Bcl6)
B cell leukemia/lymphoma 6 		ENSMUST00000023151 (Bcl6-001) 23965052-23988852 protein_coding
ENSMUST00000135352 (Bcl6-002) 23967694-23972380 retained_intron
ENSMUSG00000047531 (Rtp2)
receptor transporter protein 2 		ENSMUST00000061030 (Rtp2-201) 23925548-23930787 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003X_0001ENSG00000113916ENST00000232014ENST00000406870ENST00000419510ENST00000430339ENST00000438077ENST00000450123ENST00000470319ENST00000479110ENST00000480458ENST00000496823ENST00000621333CIL_00003X_0002ENSMUSG00000022508ENSMUST00000023151ENSMUST00000135352ENSMUSG00000047531ENSMUST00000061030
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003X_0001ENSG00000113916ENST00000232014ENST00000406870ENST00000419510ENST00000450123CIL_00003X_0002ENSMUSG00000022508ENSMUST00000023151ENSMUST00000135352ENSMUSG00000047531ENSMUST00000061030
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113916 ENST00000232014 N/A N/A N/A N/A 1.984±0.00 N/A N/A N/A N/A 2.000±0.00 4.071±0.00 1.578±0.00 0.954±0.00 N/A
ENST00000406870 N/A 2.270±0.00 0.897±0.00 2.048±1.39 N/A 5.238±0.00 N/A N/A 2.376±0.00 N/A N/A 3.229±2.59 N/A 4.433±2.94
ENST00000419510 N/A N/A N/A 1.441±1.02 N/A N/A N/A N/A 1.147±0.15 1.464±0.00 17.094±0.00 0.804±0.00 N/A 1.719±0.00
ENST00000430339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450123 N/A 5.766±0.00 N/A 9.885±0.00 N/A N/A 10.091±0.00 N/A N/A 25.868±0.00 25.728±21.50 8.064±1.91 N/A 4.840±0.00
ENST00000470319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022508 ENSMUST00000023151 19.492±14.49 18.436±3.02 7.870±0.70 2.253±0.97 13.367±4.54 4.558±0.13 5.598±2.13 5.698±0.24 1.021±0.89 14.086±0.68 13.936±7.89 7.609±2.71 2.586±1.59 0.910±0.43
ENSMUST00000135352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00 N/A N/A
ENSMUSG00000047531 ENSMUST00000061030 0.014±0.00 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.05

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