C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157851-ENSG00000084764 CGP 9606 2:26847747-27027196
GeneTranscriptPositionBiotype
ENSG00000084764 (MAPRE3)
microtubule-associated protein, RP/EB family, member 3 		ENST00000233121 (MAPRE3-001) 26970612-27027196 protein_coding
ENST00000402218 (MAPRE3-004) 27014799-27026355 protein_coding
ENST00000405074 (MAPRE3-002) 26970658-27027196 protein_coding
ENST00000458529 (MAPRE3-003) 27014768-27025909 protein_coding
ENST00000474367 (MAPRE3-005) 27014765-27023534 retained_intron
ENST00000475633 (MAPRE3-006) 26970661-27024221 retained_intron
ENST00000481222 (MAPRE3-009) 27002046-27023945 retained_intron
ENST00000491354 (MAPRE3-008) 27002856-27022851 processed_transcript
ENST00000494788 (MAPRE3-007) 26970637-27022619 retained_intron
ENSG00000157851 (DPYSL5)
dihydropyrimidinase-like 5 		ENST00000288699 (DPYSL5-001) 26848101-26950351 protein_coding
ENST00000401478 (DPYSL5-002) 26848289-26947197 protein_coding
ENST00000431402 (DPYSL5-004) 26848424-26927401 protein_coding
ENST00000434719 (DPYSL5-005) 26848508-26927356 protein_coding
ENST00000450961 (DPYSL5-003) 26847747-26927328 protein_coding
ENST00000484882 (DPYSL5-006) 26938459-26948856 retained_intron
ENST00000614712 (DPYSL5-201) 26848424-26950350 protein_coding
ENSG00000205500 (AC013472.3)
 ENST00000380387 (AC013472.3-001) 27011769-27014612 antisense
ENST00000411685 (AC013472.3-004) 26984776-27013973 antisense
ENST00000423923 (AC013472.3-003) 27013810-27014561 retained_intron
ENST00000455081 (AC013472.3-002) 26984778-27014588 antisense
ENSG00000230286 (AC013472.4)
 ENST00000416226 (AC013472.4-001) 26950308-27009807 antisense
CIL_00004I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029168-ENSMUSG00000029166 CGP 10090 5:30711564-30866106
GeneTranscriptPositionBiotype
ENSMUSG00000029166 (Mapre3)
microtubule-associated protein, RP/EB family, member 3 		ENSMUST00000031058 (Mapre3-001) 30814641-30866106 protein_coding
ENSMUST00000114724 (Mapre3-002) 30814754-30866059 protein_coding
ENSMUST00000123334 (Mapre3-005) 30814760-30862577 retained_intron
ENSMUST00000126284 (Mapre3-004) 30853799-30863358 protein_coding
ENSMUST00000146459 (Mapre3-003) 30814733-30866059 retained_intron
ENSMUSG00000029168 (Dpysl5)
dihydropyrimidinase-like 5 		ENSMUST00000088081 (Dpysl5-002) 30711894-30799369 protein_coding
ENSMUST00000101442 (Dpysl5-003) 30711901-30748014 protein_coding
ENSMUST00000114729 (Dpysl5-001) 30711564-30799375 protein_coding
ENSMUST00000127365 (Dpysl5-004) 30778130-30786934 processed_transcript
ENSMUST00000136657 (Dpysl5-005) 30791999-30796414 processed_transcript
ENSMUST00000138625 (Dpysl5-006) 30793720-30796561 retained_intron
ENSMUSG00000087258 (Gm15461)
predicted gene 15461 		ENSMUST00000143488 (Gm15461-001) 30817977-30822612 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004I_0001ENSG00000084764ENST00000233121ENST00000402218ENST00000405074ENST00000458529ENST00000474367ENST00000475633ENST00000481222ENST00000491354ENST00000494788ENSG00000157851ENST00000288699ENST00000401478ENST00000431402ENST00000434719ENST00000450961ENST00000484882ENST00000614712ENSG00000205500ENST00000380387ENST00000411685ENST00000423923ENST00000455081ENSG00000230286ENST00000416226CIL_00004I_0002ENSMUSG00000029166ENSMUST00000031058ENSMUST00000114724ENSMUST00000123334ENSMUST00000126284ENSMUST00000146459ENSMUSG00000029168ENSMUST00000088081ENSMUST00000101442ENSMUST00000114729ENSMUST00000127365ENSMUST00000136657ENSMUST00000138625ENSMUSG00000087258ENSMUST00000143488
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004I_0001ENSG00000084764ENST00000233121ENST00000402218ENST00000405074ENST00000458529ENST00000475633ENST00000481222ENST00000494788ENSG00000157851ENST00000288699ENST00000401478ENST00000484882ENST00000614712ENSG00000205500ENST00000380387ENST00000411685ENST00000423923ENST00000455081ENSG00000230286ENST00000416226CIL_00004I_0002ENSMUSG00000029166ENSMUST00000031058ENSMUST00000114724ENSMUST00000126284ENSMUST00000146459ENSMUSG00000029168ENSMUST00000088081ENSMUST00000114729ENSMUST00000127365ENSMUSG00000087258ENSMUST00000143488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084764 ENST00000233121 11.844±0.00 5.207±0.00 N/A 33.343±31.69 8.848±0.00 9.910±0.00 6.319±6.20 1.464±1.23 2.876±0.00 7.694±6.69 24.069±21.09 12.566±1.04 6.859±0.91 11.781±1.78
ENST00000402218 N/A N/A 0.430±0.00 2.964±0.00 1.823±0.00 2.999±0.00 1.236±0.00 N/A 0.473±0.00 1.550±0.00 3.179±0.00 0.245±0.00 N/A 9.872±0.00
ENST00000405074 6.978±0.00 5.504±0.00 N/A 16.529±12.37 3.724±2.73 4.215±0.00 4.678±0.00 7.763±0.00 4.273±0.00 2.538±0.00 13.187±0.00 4.970±2.68 3.489±0.52 17.362±9.79
ENST00000458529 N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A
ENST00000474367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475633 N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A 0.389±0.00 N/A N/A 0.490±0.00 N/A N/A
ENST00000481222 N/A N/A N/A N/A N/A N/A N/A 0.696±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494788 N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000157851 ENST00000288699 N/A 0.031±0.00 N/A 16.047±0.00 0.013±0.00 N/A 0.008±0.00 N/A N/A 0.055±0.00 0.010±0.00 0.175±0.13 0.011±0.00 0.484±0.00
ENST00000401478 N/A N/A N/A 1.896±0.00 N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00 2.268±0.35
ENST00000431402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484882 0.050±0.00 0.119±0.00 0.032±0.00 N/A 0.054±0.00 N/A 0.016±0.00 0.055±0.00 0.009±0.00 N/A 0.016±0.00 0.015±0.00 N/A N/A
ENST00000614712 N/A 0.030±0.00 N/A N/A 0.013±0.00 0.028±0.00 0.008±0.00 0.064±0.00 N/A 0.015±0.00 0.010±0.00 0.044±0.00 0.023±0.00 N/A
ENSG00000205500 ENST00000380387 0.098±0.00 0.239±0.00 0.034±0.00 0.232±0.00 0.307±0.03 0.170±0.04 0.007±0.00 0.221±0.02 0.280±0.20 0.265±0.08 0.092±0.00 0.214±0.22 0.092±0.00 0.539±0.20
ENST00000411685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.745±0.00
ENST00000423923 N/A N/A 0.254±0.00 N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.458±0.38
ENST00000455081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.305±0.00
ENSG00000230286 ENST00000416226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029166 ENSMUST00000031058 N/A N/A 3.115±0.75 75.709±0.00 N/A N/A 2.938±0.61 N/A N/A N/A 17.893±2.00 6.544±0.00 7.422±0.00 N/A
ENSMUST00000114724 5.226±0.79 30.784±4.06 7.170±0.80 52.803±24.65 6.719±0.89 8.498±1.25 7.702±2.49 8.231±1.97 5.228±4.41 15.688±2.54 5.640±0.93 11.259±4.95 5.179±3.64 44.759±6.41
ENSMUST00000123334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126284 N/A N/A N/A N/A 6.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146459 7.969±1.41 14.805±1.70 6.972±1.22 33.417±11.52 7.522±2.05 5.021±0.68 4.812±1.11 5.604±0.89 3.162±1.99 10.198±2.35 3.077±0.53 7.041±2.42 1.405±0.41 N/A
ENSMUSG00000029168 ENSMUST00000088081 0.104±0.04 0.258±0.16 N/A 9.607±8.84 0.126±0.04 0.301±0.11 0.234±0.02 0.096±0.03 0.028±0.01 1.394±0.36 0.257±0.12 3.097±1.69 0.112±0.06 N/A
ENSMUST00000101442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114729 0.112±0.06 0.118±0.05 0.105±0.00 77.136±52.57 0.324±0.13 0.324±0.11 0.114±0.03 0.141±0.06 0.098±0.09 0.761±0.12 0.130±0.07 5.866±2.51 0.175±0.08 13.880±6.50
ENSMUST00000127365 N/A 0.316±0.07 N/A N/A N/A 0.941±0.16 0.582±0.05 0.252±0.05 0.085±0.04 N/A N/A 15.071±0.00 N/A N/A
ENSMUST00000136657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087258 ENSMUST00000143488 N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.758±10.50

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