C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein, RP/EB family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402218 MAPRE3-004 ENSG00000084764 9606 + 2:27014799-27026355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000402218
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000402218 0.430±0.00 2.964±0.00 1.823±0.00 2.999±0.00 1.236±0.00 0.473±0.00 1.550±0.00 3.179±0.00 0.245±0.00 9.872±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0001 VISTA 2:26419781-27023232
CIL_00004I CIL_00004I_0001 CGP 2:26847747-27027196
CIL_00004J CIL_00004J_0001 CGP 2:26970612-27041695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005881 IDA cytoplasmic microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008017 ISS:IEA microtubule binding
GO:0015630 IDA microtubule cytoskeleton
GO:0030496 ISS midbody
GO:0045737 ISS positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114724 Mapre3-002 protein_coding Mus_musculus 0 1123
ENSMUST00000126284 Mapre3-004 protein_coding Mus_musculus 0 782
ENSMUST00000031058 Mapre3-001 protein_coding Mus_musculus 0 697
ENSMUST00000146459 Mapre3-003 retained_intron Mus_musculus 0 429
ENSDART00000129167 mapre1b-201 protein_coding Danio_rerio 0 272
ENSDART00000136740 mapre1b-003 protein_coding Danio_rerio 0 272
ENSDART00000133602 mapre1b-002 retained_intron Danio_rerio 0 272
ENSDART00000004474 mapre1b-001 protein_coding Danio_rerio 0 272
ENSMUST00000123334 Mapre3-005 retained_intron Mus_musculus 0 195

Loading