C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein, RP/EB family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031058 Mapre3-001 ENSMUSG00000029166 10090 + 5:30814641-30866106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartMuscleOvaryPlacentaENSMUST00000031058
Transcript ID Bladder Brain Heart Muscle Ovary Placenta
ENSMUST00000031058 3.115±0.75 75.709±0.00 2.938±0.61 17.893±2.00 6.544±0.00 7.422±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004I CIL_00004I_0002 CGP 5:30711564-30866106
CIL_00004J CIL_00004J_0002 CGP 5:30814641-30879191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005874 IDA microtubule
GO:0005881 IEA cytoplasmic microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008017 IEA:IDA microtubule binding
GO:0015630 IDA microtubule cytoskeleton
GO:0030496 IDA midbody
GO:0035371 IDA microtubule plus-end
GO:0045737 IMP positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0048471 IEA perinuclear region of cytoplasm
GO:1903033 IGI positive regulation of microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129167 mapre1b-201 protein_coding Danio_rerio 0 261
ENSDART00000136740 mapre1b-003 protein_coding Danio_rerio 0 261
ENSDART00000133602 mapre1b-002 retained_intron Danio_rerio 0 261
ENSDART00000004474 mapre1b-001 protein_coding Danio_rerio 0 261
ENST00000233121 MAPRE3-001 protein_coding Homo_sapiens 0 1932
ENST00000402218 MAPRE3-004 protein_coding Homo_sapiens 0 697
ENST00000405074 MAPRE3-002 protein_coding Homo_sapiens 0 898
ENST00000458529 MAPRE3-003 protein_coding Homo_sapiens 0 977
ENST00000474367 MAPRE3-005 retained_intron Homo_sapiens 0 429
ENST00000475633 MAPRE3-006 retained_intron Homo_sapiens 0 617
ENST00000481222 MAPRE3-009 retained_intron Homo_sapiens 0 429
ENST00000491354 MAPRE3-008 processed_transcript Homo_sapiens 0 195
ENST00000494788 MAPRE3-007 retained_intron Homo_sapiens 0 418

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