C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein, RP/EB family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000233121 MAPRE3-001 ENSG00000084764 9606 + 2:26970612-27027196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000233121
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000233121 11.844±0.00 5.207±0.00 33.343±31.69 8.848±0.00 9.910±0.00 6.319±6.20 1.464±1.23 2.876±0.00 7.694±6.69 24.069±21.09 12.566±1.04 6.859±0.91 11.781±1.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0001 VISTA 2:26419781-27023232
CIL_00004I CIL_00004I_0001 CGP 2:26847747-27027196
CIL_00004J CIL_00004J_0001 CGP 2:26970612-27041695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005874 IEA microtubule
GO:0005881 IDA cytoplasmic microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008017 IEA:ISS microtubule binding
GO:0015630 IDA microtubule cytoskeleton
GO:0030496 ISS midbody
GO:0035371 IEA microtubule plus-end
GO:0045737 ISS positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0048471 IDA perinuclear region of cytoplasm
GO:1903033 IEA positive regulation of microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031058 Mapre3-001 protein_coding Mus_musculus 0 1932
ENSMUST00000146459 Mapre3-003 retained_intron Mus_musculus 0 1243
ENSMUST00000114724 Mapre3-002 protein_coding Mus_musculus 0 898
ENSMUST00000126284 Mapre3-004 protein_coding Mus_musculus 0 693
ENSMUST00000123334 Mapre3-005 retained_intron Mus_musculus 0 379
ENSDART00000129167 mapre1b-201 protein_coding Danio_rerio 0 272
ENSDART00000136740 mapre1b-003 protein_coding Danio_rerio 0 272
ENSDART00000133602 mapre1b-002 retained_intron Danio_rerio 0 272
ENSDART00000004474 mapre1b-001 protein_coding Danio_rerio 0 272

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