C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000084764-ENSG00000119777 CGP 9606 2:26970612-27041695
GeneTranscriptPositionBiotype
ENSG00000084764 (MAPRE3)
microtubule-associated protein, RP/EB family, member 3 		ENST00000233121 (MAPRE3-001) 26970612-27027196 protein_coding
ENST00000402218 (MAPRE3-004) 27014799-27026355 protein_coding
ENST00000405074 (MAPRE3-002) 26970658-27027196 protein_coding
ENST00000458529 (MAPRE3-003) 27014768-27025909 protein_coding
ENST00000474367 (MAPRE3-005) 27014765-27023534 retained_intron
ENST00000475633 (MAPRE3-006) 26970661-27024221 retained_intron
ENST00000481222 (MAPRE3-009) 27002046-27023945 retained_intron
ENST00000491354 (MAPRE3-008) 27002856-27022851 processed_transcript
ENST00000494788 (MAPRE3-007) 26970637-27022619 retained_intron
ENSG00000119777 (TMEM214)
transmembrane protein 214 		ENST00000238788 (TMEM214-001) 27032954-27041695 protein_coding
ENST00000321326 (TMEM214-003) 27032954-27041694 nonsense_mediated_decay
ENST00000404032 (TMEM214-002) 27032977-27041693 protein_coding
ENST00000425720 (TMEM214-005) 27036491-27038794 protein_coding
ENST00000434544 (TMEM214-013) 27038710-27040999 nonsense_mediated_decay
ENST00000435172 (TMEM214-004) 27035270-27040416 nonsense_mediated_decay
ENST00000444135 (TMEM214-010) 27037875-27040492 protein_coding
ENST00000460665 (TMEM214-012) 27039361-27041687 retained_intron
ENST00000460904 (TMEM214-006) 27036526-27037815 retained_intron
ENST00000469445 (TMEM214-011) 27039920-27041033 retained_intron
ENST00000475258 (TMEM214-007) 27035520-27037664 retained_intron
ENST00000478980 (TMEM214-009) 27033138-27034609 retained_intron
ENST00000495312 (TMEM214-008) 27032910-27035481 retained_intron
ENSG00000205500 (AC013472.3)
 ENST00000380387 (AC013472.3-001) 27011769-27014612 antisense
ENST00000411685 (AC013472.3-004) 26984776-27013973 antisense
ENST00000423923 (AC013472.3-003) 27013810-27014561 retained_intron
ENST00000455081 (AC013472.3-002) 26984778-27014588 antisense
ENSG00000230286 (AC013472.4)
 ENST00000416226 (AC013472.4-001) 26950308-27009807 antisense
CIL_00004J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029166-ENSMUSG00000038828 CGP 10090 5:30814641-30879191
GeneTranscriptPositionBiotype
ENSMUSG00000029166 (Mapre3)
microtubule-associated protein, RP/EB family, member 3 		ENSMUST00000031058 (Mapre3-001) 30814641-30866106 protein_coding
ENSMUST00000114724 (Mapre3-002) 30814754-30866059 protein_coding
ENSMUST00000123334 (Mapre3-005) 30814760-30862577 retained_intron
ENSMUST00000126284 (Mapre3-004) 30853799-30863358 protein_coding
ENSMUST00000146459 (Mapre3-003) 30814733-30866059 retained_intron
ENSMUSG00000038828 (Tmem214)
transmembrane protein 214 		ENSMUST00000046349 (Tmem214-001) 30869579-30879191 protein_coding
ENSMUST00000114716 (Tmem214-002) 30869631-30877044 protein_coding
ENSMUST00000132288 (Tmem214-005) 30871818-30877463 retained_intron
ENSMUST00000146662 (Tmem214-006) 30871773-30873594 processed_transcript
ENSMUST00000147406 (Tmem214-007) 30870364-30871485 retained_intron
ENSMUST00000149013 (Tmem214-003) 30869633-30878364 retained_intron
ENSMUST00000150310 (Tmem214-004) 30869635-30877468 retained_intron
ENSMUSG00000087258 (Gm15461)
predicted gene 15461 		ENSMUST00000143488 (Gm15461-001) 30817977-30822612 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004J_0001ENSG00000084764ENST00000233121ENST00000402218ENST00000405074ENST00000458529ENST00000474367ENST00000475633ENST00000481222ENST00000491354ENST00000494788ENSG00000119777ENST00000238788ENST00000321326ENST00000404032ENST00000425720ENST00000434544ENST00000435172ENST00000444135ENST00000460665ENST00000460904ENST00000469445ENST00000475258ENST00000478980ENST00000495312ENSG00000205500ENST00000380387ENST00000411685ENST00000423923ENST00000455081ENSG00000230286ENST00000416226CIL_00004J_0002ENSMUSG00000029166ENSMUST00000031058ENSMUST00000114724ENSMUST00000123334ENSMUST00000126284ENSMUST00000146459ENSMUSG00000038828ENSMUST00000046349ENSMUST00000114716ENSMUST00000132288ENSMUST00000146662ENSMUST00000147406ENSMUST00000149013ENSMUST00000150310ENSMUSG00000087258ENSMUST00000143488
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004J_0001ENSG00000084764ENST00000233121ENST00000402218ENST00000405074ENST00000458529ENST00000475633ENST00000481222ENST00000494788ENSG00000119777ENST00000238788ENST00000321326ENST00000404032ENST00000460665ENST00000460904ENSG00000205500ENST00000380387ENST00000411685ENST00000423923ENST00000455081ENSG00000230286ENST00000416226CIL_00004J_0002ENSMUSG00000029166ENSMUST00000031058ENSMUST00000114724ENSMUST00000126284ENSMUST00000146459ENSMUSG00000038828ENSMUST00000046349ENSMUST00000114716ENSMUST00000132288ENSMUST00000146662ENSMUST00000149013ENSMUST00000150310ENSMUSG00000087258ENSMUST00000143488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084764 ENST00000233121 11.844±0.00 5.207±0.00 N/A 33.343±31.69 8.848±0.00 9.910±0.00 6.319±6.20 1.464±1.23 2.876±0.00 7.694±6.69 24.069±21.09 12.566±1.04 6.859±0.91 11.781±1.78
ENST00000402218 N/A N/A 0.430±0.00 2.964±0.00 1.823±0.00 2.999±0.00 1.236±0.00 N/A 0.473±0.00 1.550±0.00 3.179±0.00 0.245±0.00 N/A 9.872±0.00
ENST00000405074 6.978±0.00 5.504±0.00 N/A 16.529±12.37 3.724±2.73 4.215±0.00 4.678±0.00 7.763±0.00 4.273±0.00 2.538±0.00 13.187±0.00 4.970±2.68 3.489±0.52 17.362±9.79
ENST00000458529 N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A
ENST00000474367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475633 N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A 0.389±0.00 N/A N/A 0.490±0.00 N/A N/A
ENST00000481222 N/A N/A N/A N/A N/A N/A N/A 0.696±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494788 N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000119777 ENST00000238788 27.931±0.00 16.035±0.00 N/A 2.273±1.96 13.224±10.45 8.530±7.81 6.142±5.28 15.726±14.00 29.950±0.00 11.522±9.98 14.842±14.71 26.665±12.33 39.983±10.64 17.333±7.07
ENST00000321326 N/A N/A N/A N/A N/A N/A N/A N/A 1.465±0.00 N/A N/A N/A N/A N/A
ENST00000404032 12.074±0.00 13.272±0.00 N/A 3.330±0.00 7.605±0.00 3.622±0.00 N/A N/A N/A 0.460±0.00 N/A 13.363±6.92 26.034±0.00 12.356±6.17
ENST00000425720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460665 N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460904 N/A N/A N/A N/A N/A N/A 1.789±0.00 N/A N/A N/A N/A 3.768±0.00 N/A N/A
ENST00000469445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205500 ENST00000380387 0.098±0.00 0.239±0.00 0.034±0.00 0.232±0.00 0.307±0.03 0.170±0.04 0.007±0.00 0.221±0.02 0.280±0.20 0.265±0.08 0.092±0.00 0.214±0.22 0.092±0.00 0.539±0.20
ENST00000411685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.745±0.00
ENST00000423923 N/A N/A 0.254±0.00 N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.458±0.38
ENST00000455081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.305±0.00
ENSG00000230286 ENST00000416226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029166 ENSMUST00000031058 N/A N/A 3.115±0.75 75.709±0.00 N/A N/A 2.938±0.61 N/A N/A N/A 17.893±2.00 6.544±0.00 7.422±0.00 N/A
ENSMUST00000114724 5.226±0.79 30.784±4.06 7.170±0.80 52.803±24.65 6.719±0.89 8.498±1.25 7.702±2.49 8.231±1.97 5.228±4.41 15.688±2.54 5.640±0.93 11.259±4.95 5.179±3.64 44.759±6.41
ENSMUST00000123334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126284 N/A N/A N/A N/A 6.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146459 7.969±1.41 14.805±1.70 6.972±1.22 33.417±11.52 7.522±2.05 5.021±0.68 4.812±1.11 5.604±0.89 3.162±1.99 10.198±2.35 3.077±0.53 7.041±2.42 1.405±0.41 N/A
ENSMUSG00000038828 ENSMUST00000046349 N/A N/A N/A 2.128±0.96 N/A N/A N/A N/A N/A 2.869±0.00 0.596±0.00 1.754±0.00 N/A 4.218±0.00
ENSMUST00000114716 9.354±1.02 12.366±2.02 7.178±0.00 4.445±1.38 13.038±1.26 18.895±3.46 5.786±0.37 11.497±3.42 8.859±2.87 13.962±1.94 3.119±0.91 30.325±11.22 13.854±5.73 19.685±7.69
ENSMUST00000132288 14.931±5.11 23.126±1.78 16.695±5.98 18.682±17.02 17.769±4.34 27.305±1.52 7.688±1.41 15.489±2.54 13.661±4.42 17.573±2.79 2.956±1.11 42.419±17.86 16.701±6.75 17.343±8.33
ENSMUST00000146662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.556±0.00 N/A
ENSMUST00000147406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149013 7.736±2.23 5.485±0.94 3.380±0.00 3.290±1.48 4.292±0.97 6.117±0.95 N/A 4.383±1.15 3.516±1.51 4.803±0.82 1.260±0.37 8.672±3.72 5.289±2.06 4.998±2.83
ENSMUST00000150310 N/A N/A 2.207±0.00 1.093±0.00 1.388±0.00 N/A N/A N/A 1.986±0.23 N/A 0.720±0.00 3.546±1.24 3.197±1.36 N/A
ENSMUSG00000087258 ENSMUST00000143488 N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.758±10.50

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