C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 44kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296519 CEP44-201 ENSG00000164118 9606 + 4:174299070-174320331 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryTestisENST00000296519
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000296519 0.627±0.00 0.491±0.00 1.065±0.19 0.918±0.00 0.842±0.00 1.382±0.00 1.364±0.00 1.471±0.36 1.889±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007S CIL_00007S_0002 CGP 4:173524969-174284264
CIL_00007V CIL_00007V_0002 CGP 4:174236658-174333380
CIL_00007U CIL_00007U_0002 CGP 4:174283677-174523154

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0030496 TAS midbody

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040330 Cep44-001 protein_coding Mus_musculus 0 765
ENSMUST00000140107 Cep44-004 protein_coding Mus_musculus 0 466
ENSMUST00000123493 Cep44-008 protein_coding Mus_musculus 0 392
ENSMUST00000134162 Cep44-006 protein_coding Mus_musculus 0 331
ENSMUST00000147575 Cpa6-003 retained_intron Mus_musculus 0.00000001 68
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.00002 57

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