C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000CY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071250-ENSDARG00000059354 CGP 7955 19:770242-786969
GeneTranscriptPositionBiotype
ENSDARG00000059354 (C19H1orf85)
chromosome 1 open reading frame 85 		ENSDART00000082454 (C19H1orf85-001) 777293-786969 protein_coding
ENSDART00000140119 (C19H1orf85-002) 783676-786886 retained_intron
ENSDARG00000071250 (tmem79a)
transmembrane protein 79a 		ENSDART00000138406 (tmem79a-002) 770281-772106 protein_coding
ENSDART00000146554 (tmem79a-001) 770242-775540 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000CY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163472-ENSG00000198715 CGP 9606 1:156282935-156295689
GeneTranscriptPositionBiotype
ENSG00000163472 (TMEM79)
transmembrane protein 79 		ENST00000295694 (TMEM79-001) 156282948-156292443 protein_coding
ENST00000357501 (TMEM79-004) 156282953-156291948 protein_coding
ENST00000405535 (TMEM79-201) 156284279-156292443 protein_coding
ENST00000456810 (TMEM79-005) 156284322-156291525 protein_coding
ENST00000463670 (TMEM79-002) 156282935-156292443 processed_transcript
ENST00000485135 (TMEM79-006) 156286276-156293185 processed_transcript
ENST00000495881 (TMEM79-003) 156284314-156292443 processed_transcript
ENSG00000198715 (C1orf85)
chromosome 1 open reading frame 85 		ENST00000362007 (C1orf85-001) 156292688-156295672 protein_coding
ENST00000368264 (C1orf85-006) 156293423-156295654 nonsense_mediated_decay
ENST00000461597 (C1orf85-009) 156290089-156293381 nonsense_mediated_decay
ENST00000472870 (C1orf85-007) 156290541-156295654 nonsense_mediated_decay
ENST00000476177 (C1orf85-002) 156293373-156295653 nonsense_mediated_decay
ENST00000479084 (C1orf85-003) 156293518-156294992 retained_intron
ENST00000480968 (C1orf85-010) 156290687-156291506 processed_transcript
ENST00000481050 (C1orf85-012) 156292695-156294076 protein_coding
ENST00000482579 (C1orf85-011) 156292688-156293667 processed_transcript
ENST00000484214 (C1orf85-005) 156293617-156295647 retained_intron
ENST00000497831 (C1orf85-008) 156290096-156291550 processed_transcript
ENST00000497955 (C1orf85-004) 156293384-156294513 retained_intron
ENST00000612353 (C1orf85-201) 156292687-156295689 protein_coding
ENST00000614643 (C1orf85-202) 156292687-156295689 protein_coding
ENST00000622703 (C1orf85-203) 156292687-156295689 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CY_0001ENSDARG00000059354ENSDART00000082454ENSDART00000140119ENSDARG00000071250ENSDART00000138406ENSDART00000146554CIL_0000CY_0002ENSG00000163472ENST00000295694ENST00000357501ENST00000405535ENST00000456810ENST00000463670ENST00000485135ENST00000495881ENSG00000198715ENST00000362007ENST00000368264ENST00000461597ENST00000472870ENST00000476177ENST00000479084ENST00000480968ENST00000481050ENST00000482579ENST00000484214ENST00000497831ENST00000497955ENST00000612353ENST00000614643ENST00000622703
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CY_0001ENSDARG00000059354ENSDART00000082454ENSDARG00000071250ENSDART00000138406ENSDART00000146554CIL_0000CY_0002ENSG00000163472ENST00000295694ENST00000405535ENST00000463670ENST00000495881ENSG00000198715ENST00000362007ENST00000461597ENST00000476177ENST00000479084ENST00000480968ENST00000481050ENST00000482579ENST00000484214ENST00000497831ENST00000612353ENST00000622703
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059354 ENSDART00000082454 N/A N/A N/A 5.074±1.01 N/A N/A 27.167±18.39 42.292±26.83 0.799±0.00 N/A 3.455±0.00 N/A N/A N/A
ENSDART00000140119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071250 ENSDART00000138406 N/A N/A N/A 0.860±0.00 N/A N/A N/A 6.984±0.00 0.049±0.00 N/A N/A N/A N/A N/A
ENSDART00000146554 N/A N/A N/A 0.054±0.02 N/A N/A 0.096±0.02 3.686±0.00 0.176±0.00 N/A 0.033±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163472 ENST00000295694 N/A N/A N/A 0.955±0.00 0.331±0.00 N/A N/A N/A N/A N/A N/A 2.655±0.00 N/A 2.507±0.56
ENST00000357501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.447±0.00 5.631±4.39 N/A N/A
ENST00000456810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463670 N/A N/A N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.969±0.00 N/A N/A
ENSG00000198715 ENST00000362007 23.553±0.00 7.725±0.00 N/A 1.682±0.00 10.821±9.88 2.803±0.00 2.957±2.13 12.361±0.00 6.430±5.77 6.563±5.07 N/A 14.433±9.39 46.110±12.18 4.059±1.71
ENST00000368264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00
ENST00000472870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476177 N/A N/A N/A N/A N/A N/A N/A N/A 0.574±0.00 N/A N/A N/A N/A N/A
ENST00000479084 N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A 0.385±0.00 N/A N/A N/A
ENST00000480968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.209±0.00 N/A N/A N/A
ENST00000481050 N/A 12.430±0.00 N/A N/A N/A N/A N/A 12.103±0.00 10.829±0.00 N/A 1.464±0.00 24.319±0.00 23.820±0.00 N/A
ENST00000482579 N/A N/A N/A N/A N/A 1.595±0.00 N/A N/A N/A N/A N/A 3.636±0.00 N/A N/A
ENST00000484214 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A N/A N/A
ENST00000497831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.807±0.00
ENST00000497955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612353 N/A N/A 1.551±0.00 N/A N/A N/A N/A 1.511±0.00 N/A N/A 1.493±0.00 3.479±0.61 N/A N/A
ENST00000614643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622703 N/A 5.860±0.00 N/A 1.620±0.49 N/A 7.311±0.00 2.535±0.00 4.627±1.80 6.080±0.00 N/A 1.939±0.00 12.359±7.33 16.882±0.55 6.525±0.00

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