C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 1 open reading frame 85
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612353 C1orf85-201 ENSG00000198715 9606 - 1:156292687-156295689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyMuscleOvaryENST00000612353
Transcript ID Bladder Kidney Muscle Ovary
ENST00000612353 1.551±0.00 1.511±0.00 1.493±0.00 3.479±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_0000CY CIL_0000CY_0002 CGP 1:156282935-156295689

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177005 0610031J06Rik-001 protein_coding Mus_musculus 0 640
ENSMUST00000001454 0610031J06Rik-009 protein_coding Mus_musculus 0 276
ENSMUST00000176519 0610031J06Rik-008 protein_coding Mus_musculus 0 276
ENSMUST00000153716 0610031J06Rik-003 retained_intron Mus_musculus 0 276
ENSMUST00000152801 0610031J06Rik-002 retained_intron Mus_musculus 0 222
ENSMUST00000131666 0610031J06Rik-004 nonsense_mediated_decay Mus_musculus 0 206

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