C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RUN and FYVE domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381006 RUFY3-002 ENSG00000018189 9606 + 4:70721995-70807315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000381006
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000381006 2.046±0.00 1.139±0.00 1.217±0.00 2.096±0.00 0.880±0.03 1.306±0.00 4.316±0.00 1.514±0.00 5.644±1.09 1.170±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D6 CIL_0000D6_0001 CGP 4:70688479-70807315
CIL_0005LT CIL_0005LT_0002 CGP 4:70704204-70839945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0030175 ISS filopodium
GO:0030426 ISS growth cone
GO:0046872 IEA metal ion binding
GO:0050771 ISS negative regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031229 Rufy3-201 protein_coding Mus_musculus 0 1903
ENSDART00000039973 rufy3-201 protein_coding Danio_rerio 0 778

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