C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000D8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156136-ENSG00000080493 CGP 9606 4:70992538-71572087
GeneTranscriptPositionBiotype
ENSG00000080493 (SLC4A4)
solute carrier family 4 (sodium bicarbonate cotransporter), member 4 		ENST00000264485 (SLC4A4-002) 71187286-71569717 protein_coding
ENST00000340595 (SLC4A4-001) 71339053-71572087 protein_coding
ENST00000351898 (SLC4A4-003) 71187327-71568458 protein_coding
ENST00000425175 (SLC4A4-201) 71187286-71572087 protein_coding
ENST00000512686 (SLC4A4-004) 71339053-71473319 protein_coding
ENST00000514331 (SLC4A4-005) 71255218-71473307 processed_transcript
ENSG00000156136 (DCK)
deoxycytidine kinase 		ENST00000286648 (DCK-001) 70993439-71030914 protein_coding
ENST00000503359 (DCK-002) 70993563-71030914 nonsense_mediated_decay
ENST00000504730 (DCK-004) 70993638-71030914 protein_coding
ENST00000504952 (DCK-005) 70993638-71030914 protein_coding
ENST00000509617 (DCK-006) 70992538-70993880 protein_coding
ENST00000509764 (DCK-003) 71025884-71026799 retained_intron
ENSG00000173542 (MOB1B)
MOB kinase activator 1B 		ENST00000309395 (MOB1B-001) 70902336-70988168 protein_coding
ENST00000396051 (MOB1B-002) 70902378-70982242 protein_coding
ENST00000502869 (MOB1B-004) 70902326-70975254 protein_coding
ENST00000509041 (MOB1B-003) 70902347-70976743 retained_intron
ENST00000511449 (MOB1B-005) 70902384-71022449 processed_transcript
ENSG00000249170 (RP11-1J11.1)
 ENST00000514650 (RP11-1J11.1-001) 71300258-71301235 processed_pseudogene
ENSG00000270098 (LDHAL6EP)
lactate dehydrogenase A-like 6E, pseudogene 		ENST00000602428 (LDHAL6EP-001) 71434405-71437924 processed_pseudogene
CIL_0000D8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029366-ENSMUSG00000060961 CGP 10090 5:88764996-89239653
GeneTranscriptPositionBiotype
ENSMUSG00000029366 (Dck)
deoxycytidine kinase 		ENSMUST00000031311 (Dck-001) 88764996-88783281 protein_coding
ENSMUSG00000082389 (Mkrn1-ps1)
makorin, ring finger protein 1, pseudogene 1 		ENSMUST00000122035 (Mkrn1-ps1-001) 88838009-88839402 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D8_0001ENSG00000080493ENST00000264485ENST00000340595ENST00000351898ENST00000425175ENST00000512686ENST00000514331ENSG00000156136ENST00000286648ENST00000503359ENST00000504730ENST00000504952ENST00000509617ENST00000509764ENSG00000173542ENST00000309395ENST00000396051ENST00000502869ENST00000509041ENST00000511449ENSG00000249170ENST00000514650ENSG00000270098ENST00000602428CIL_0000D8_0002ENSMUSG00000029366ENSMUST00000031311ENSMUSG00000082389ENSMUST00000122035
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D8_0001ENSG00000080493ENST00000264485ENST00000340595ENST00000351898ENST00000425175ENST00000512686ENST00000514331ENSG00000156136ENST00000286648ENST00000503359ENST00000504730ENST00000504952ENSG00000173542ENST00000309395ENSG00000249170ENST00000514650ENSG00000270098ENST00000602428CIL_0000D8_0002ENSMUSG00000029366ENSMUST00000031311ENSMUSG00000082389ENSMUST00000122035
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080493 ENST00000264485 N/A N/A N/A N/A N/A 6.698±0.00 0.504±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000340595 N/A N/A 11.138±0.00 2.135±0.00 0.611±0.00 N/A 1.036±0.00 18.165±0.00 N/A 0.673±0.00 0.129±0.00 N/A N/A 0.068±0.00
ENST00000351898 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.780±0.00 N/A N/A N/A 0.038±0.00
ENST00000425175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.271±0.00 N/A 0.343±0.00
ENST00000512686 N/A N/A 24.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENST00000514331 N/A N/A N/A 4.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 0.325±0.02
ENSG00000156136 ENST00000286648 2.588±0.00 6.351±0.00 N/A 11.605±3.00 4.223±0.70 2.181±0.00 2.159±0.00 4.336±0.00 1.044±0.00 N/A 1.555±0.00 4.760±2.12 3.771±0.03 4.387±0.00
ENST00000503359 N/A N/A N/A N/A N/A 1.161±0.00 0.815±0.00 N/A N/A N/A 0.690±0.00 N/A 1.450±0.00 N/A
ENST00000504730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.708±0.00 N/A
ENST00000504952 N/A N/A N/A N/A N/A 5.827±0.00 1.047±0.00 1.207±0.00 3.491±0.00 2.237±0.00 0.422±0.00 10.002±0.00 3.797±0.00 5.921±0.00
ENST00000509617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173542 ENST00000309395 2.572±0.00 2.322±0.00 2.964±0.00 3.105±1.66 2.632±0.13 2.257±0.01 1.116±0.50 5.044±3.79 1.871±0.96 3.276±0.52 0.715±0.28 2.458±1.01 1.359±0.45 3.078±0.40
ENST00000396051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249170 ENST00000514650 N/A N/A 0.867±0.00 0.682±0.00 0.379±0.00 N/A 0.244±0.22 0.241±0.22 0.202±0.00 0.995±0.00 N/A N/A N/A N/A
ENSG00000270098 ENST00000602428 0.031±0.00 N/A N/A 0.260±0.00 0.172±0.00 0.808±0.00 N/A 0.322±0.00 0.018±0.00 0.371±0.00 N/A N/A N/A 0.025±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029366 ENSMUST00000031311 2.906±0.77 1.775±0.40 2.654±0.12 13.359±8.18 3.917±1.89 2.392±0.61 0.997±0.06 1.126±0.22 17.155±17.77 2.403±0.34 0.664±0.11 2.349±0.63 5.378±3.05 0.898±0.36
ENSMUSG00000082389 ENSMUST00000122035 N/A N/A N/A 0.021±0.00 0.067±0.00 N/A N/A N/A 0.005±0.00 N/A N/A 0.020±0.00 N/A 0.025±0.00

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