C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIIA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419181 GTF3A-002 ENSG00000122034 9606 + 13:27424662-27435688 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungMusclePlacentaTestisENST00000419181
Transcript ID Liver Lung Muscle Placenta Testis
ENST00000419181 2.777±0.00 11.636±0.00 27.793±0.00 9.292±0.00 20.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MH CIL_0004MH_0001 CGP 13:27270327-27435823
CIL_0000G7 CIL_0000G7_0002 CGP 13:27424544-27450591

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146511 Gtf3a-001 protein_coding Mus_musculus 0 475
ENSMUST00000133682 Gtf3a-002 retained_intron Mus_musculus 0 475
ENSMUST00000132102 Gtf3a-003 protein_coding Mus_musculus 0 475
ENSMUST00000133296 Gtf3a-004 retained_intron Mus_musculus 0 305

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