C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018426-ENSDARG00000044298 CGP 7955 10:16035479-16063987
GeneTranscriptPositionBiotype
ENSDARG00000018426 (aldh7a1)
aldehyde dehydrogenase 7 family, member A1 		ENSDART00000122540 (aldh7a1-001) 16035479-16056656 protein_coding
ENSDARG00000044298 (phax)
phosphorylated adaptor for RNA export 		ENSDART00000065036 (phax-001) 16057834-16063987 protein_coding
CIL_0000HH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164904-ENSG00000164902 CGP 9606 5:126541841-126627252
GeneTranscriptPositionBiotype
ENSG00000164902 (PHAX)
phosphorylated adaptor for RNA export 		ENST00000297540 (PHAX-001) 126600268-126627252 protein_coding
ENST00000505674 (PHAX-004) 126603561-126617333 retained_intron
ENST00000511371 (PHAX-007) 126608357-126625209 retained_intron
ENST00000513813 (PHAX-005) 126617235-126625478 retained_intron
ENST00000514725 (PHAX-006) 126600925-126604064 processed_transcript
ENSG00000164904 (ALDH7A1)
aldehyde dehydrogenase 7 family, member A1 		ENST00000409134 (ALDH7A1-001) 126541841-126595418 protein_coding
ENST00000412186 (ALDH7A1-002) 126583946-126595362 nonsense_mediated_decay
ENST00000413020 (ALDH7A1-006) 126564514-126595218 processed_transcript
ENST00000433026 (ALDH7A1-005) 126564376-126580090 processed_transcript
ENST00000447989 (ALDH7A1-201) 126541843-126595390 protein_coding
ENST00000458249 (ALDH7A1-004) 126568259-126595198 nonsense_mediated_decay
ENST00000476328 (ALDH7A1-009) 126549892-126552102 retained_intron
ENST00000479989 (ALDH7A1-003) 126583932-126594439 processed_transcript
ENST00000485852 (ALDH7A1-008) 126544739-126550164 retained_intron
ENST00000497231 (ALDH7A1-010) 126544757-126562205 retained_intron
ENST00000503281 (ALDH7A1-013) 126552021-126595112 processed_transcript
ENST00000509270 (ALDH7A1-015) 126577184-126595219 protein_coding
ENST00000509459 (ALDH7A1-014) 126556007-126595071 processed_transcript
ENST00000510111 (ALDH7A1-016) 126568324-126595192 protein_coding
ENST00000511266 (ALDH7A1-012) 126575437-126595153 processed_transcript
ENST00000553117 (ALDH7A1-017) 126544596-126595336 protein_coding
CIL_0000HH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053644-ENSMUSG00000008301 CGP 10090 18:56509687-56587712
GeneTranscriptPositionBiotype
ENSMUSG00000008301 (Phax)
phosphorylated adaptor for RNA export 		ENSMUST00000008445 (Phax-001) 56572822-56587712 protein_coding
ENSMUST00000130163 (Phax-002) 56562443-56587189 protein_coding
ENSMUST00000132628 (Phax-003) 56562593-56580300 protein_coding
ENSMUSG00000053644 (Aldh7a1)
aldehyde dehydrogenase family 7, member A1 		ENSMUST00000066208 (Aldh7a1-002) 56526744-56562309 protein_coding
ENSMUST00000168517 (Aldh7a1-004) 56532539-56537617 retained_intron
ENSMUST00000170309 (Aldh7a1-006) 56537248-56562226 protein_coding
ENSMUST00000171844 (Aldh7a1-005) 56550367-56562197 protein_coding
ENSMUST00000171851 (Aldh7a1-003) 56546920-56559422 retained_intron
ENSMUST00000172734 (Aldh7a1-007) 56526605-56562328 protein_coding
ENSMUST00000172902 (Aldh7a1-009) 56509687-56526849 processed_transcript
ENSMUST00000174518 (Aldh7a1-001) 56524722-56572951 protein_coding
ENSMUST00000174704 (Aldh7a1-008) 56526750-56562218 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HH_0001ENSDARG00000018426ENSDART00000122540ENSDARG00000044298ENSDART00000065036CIL_0000HH_0002ENSG00000164902ENST00000297540ENST00000505674ENST00000511371ENST00000513813ENST00000514725ENSG00000164904ENST00000409134ENST00000412186ENST00000413020ENST00000433026ENST00000447989ENST00000458249ENST00000476328ENST00000479989ENST00000485852ENST00000497231ENST00000503281ENST00000509270ENST00000509459ENST00000510111ENST00000511266ENST00000553117CIL_0000HH_0003ENSMUSG00000008301ENSMUST00000008445ENSMUST00000130163ENSMUST00000132628ENSMUSG00000053644ENSMUST00000066208ENSMUST00000168517ENSMUST00000170309ENSMUST00000171844ENSMUST00000171851ENSMUST00000172734ENSMUST00000172902ENSMUST00000174518ENSMUST00000174704
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HH_0001ENSDARG00000018426ENSDART00000122540ENSDARG00000044298ENSDART00000065036CIL_0000HH_0002ENSG00000164902ENST00000297540ENST00000505674ENST00000511371ENST00000513813ENST00000514725ENSG00000164904ENST00000409134ENST00000413020ENST00000458249ENST00000485852ENST00000497231ENST00000503281ENST00000509459ENST00000511266ENST00000553117CIL_0000HH_0003ENSMUSG00000008301ENSMUST00000008445ENSMUST00000130163ENSMUST00000132628ENSMUSG00000053644ENSMUST00000066208ENSMUST00000174518ENSMUST00000174704
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018426 ENSDART00000122540 N/A N/A N/A 27.183±10.93 N/A N/A 63.026±11.24 28.795±37.92 10.403±0.00 N/A 26.349±0.00 N/A N/A N/A
ENSDARG00000044298 ENSDART00000065036 N/A N/A N/A 7.110±0.59 N/A N/A 4.637±0.66 23.666±1.69 0.459±0.00 N/A 1.658±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164902 ENST00000297540 2.730±0.00 3.739±0.00 0.490±0.00 2.938±0.83 2.531±1.41 2.294±1.56 1.717±1.21 2.975±1.83 2.209±0.46 1.085±0.23 2.026±0.00 3.248±2.25 2.604±0.36 3.657±1.57
ENST00000505674 5.364±0.00 4.703±0.00 1.829±0.00 9.419±1.10 5.628±2.67 6.045±0.87 2.093±0.89 5.041±1.71 3.986±0.78 3.142±0.00 1.793±0.79 3.830±1.24 6.872±4.53 9.224±3.24
ENST00000511371 3.812±0.00 2.747±0.00 3.500±0.00 5.393±0.79 1.986±0.00 4.984±0.79 1.182±0.44 2.760±0.00 2.189±0.00 2.397±1.27 1.669±0.00 4.529±3.20 N/A 6.392±0.08
ENST00000513813 N/A N/A N/A N/A N/A N/A N/A 2.621±0.00 N/A N/A N/A 1.723±0.45 4.130±1.87 N/A
ENST00000514725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.260±0.00 N/A N/A N/A
ENSG00000164904 ENST00000409134 0.759±0.00 0.906±0.00 1.745±0.00 15.495±0.00 2.851±0.00 0.279±0.00 0.933±0.78 2.297±0.40 N/A 0.629±0.23 N/A 4.926±2.78 4.952±4.01 2.451±0.31
ENST00000412186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413020 N/A N/A 5.279±0.00 N/A 1.031±0.00 N/A N/A 11.563±0.00 3.351±0.00 N/A N/A N/A 17.085±6.39 N/A
ENST00000433026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458249 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.946±0.00 N/A N/A N/A N/A
ENST00000476328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485852 N/A 4.663±0.00 N/A N/A N/A N/A 1.923±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497231 N/A N/A N/A N/A 0.468±0.00 2.176±0.00 0.342±0.00 N/A 0.895±0.00 N/A 0.454±0.00 0.828±0.00 N/A N/A
ENST00000503281 7.185±0.00 5.164±0.00 4.039±0.00 N/A 8.154±6.68 N/A 6.482±0.00 21.600±0.00 13.739±0.00 5.658±0.00 1.698±1.28 20.678±2.96 83.983±0.00 13.288±0.00
ENST00000509270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509459 N/A N/A N/A N/A N/A 4.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.329±0.00 115.460±0.00 11.055±0.00
ENST00000553117 7.363±0.00 3.543±0.00 2.278±0.00 13.026±10.41 9.847±0.00 3.982±2.50 4.491±0.00 11.599±6.40 10.112±0.00 3.779±0.00 0.846±0.52 9.356±6.32 24.951±23.84 8.013±1.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008301 ENSMUST00000008445 7.814±1.92 7.376±0.34 12.972±0.56 23.548±1.83 5.583±0.39 5.077±1.03 3.533±0.34 N/A 10.881±1.54 6.944±0.47 3.472±0.50 11.080±4.29 20.065±4.43 3.792±0.25
ENSMUST00000130163 N/A N/A N/A 24.035±0.00 N/A N/A N/A N/A N/A N/A 4.240±0.72 19.709±7.22 34.961±17.61 8.198±0.00
ENSMUST00000132628 N/A N/A N/A 64.525±0.00 N/A N/A N/A N/A N/A N/A N/A 83.523±0.00 75.858±3.98 18.774±0.00
ENSMUSG00000053644 ENSMUST00000066208 34.251±9.01 20.978±3.58 28.125±0.18 15.890±1.33 18.663±1.87 7.573±1.09 10.628±0.55 181.070±7.98 124.568±69.95 18.298±0.87 10.865±1.34 38.264±9.86 94.620±69.54 16.569±1.71
ENSMUST00000168517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174518 3.012±0.74 N/A 3.299±0.06 3.142±0.60 2.147±0.37 1.151±0.04 1.284±0.17 N/A N/A 2.462±0.56 1.189±0.12 4.151±0.77 N/A 2.079±0.35
ENSMUST00000174704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.380±0.00 24.989±6.79 5.300±0.00

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