C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000JW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203952-ENSG00000156531 CGP 9606 X:134237047-134428790
GeneTranscriptPositionBiotype
ENSG00000156531 (PHF6)
PHD finger protein 6
ENST00000332070 (PHF6-004) 134373312-134428789 protein_coding
ENST00000370799 (PHF6-002) 134373320-134420323 protein_coding
ENST00000370800 (PHF6-003) 134373373-134415292 protein_coding
ENST00000370803 (PHF6-001) 134373253-134428790 protein_coding
ENSG00000203952 (CCDC160)
coiled-coil domain containing 160
ENST00000370809 (CCDC160-201) 134237047-134245778 protein_coding
ENST00000517294 (CCDC160-001) 134237047-134246207 protein_coding
ENSG00000214961 (RP11-355K23B.1)
ENST00000399325 (RP11-355K23B.1-001) 134272287-134273658 processed_pseudogene
ENSG00000251962 (AL591668.1)
ENST00000516153 (AL591668.1-201) 134403298-134403382 miRNA
CIL_0000JW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073207-ENSMUSG00000025626 CGP 10090 X:52791200-52956943
GeneTranscriptPositionBiotype
ENSMUSG00000025626 (Phf6)
PHD finger protein 6
ENSMUST00000078944 (Phf6-001) 52912266-52956943 protein_coding
ENSMUST00000101587 (Phf6-003) 52912295-52948500 protein_coding
ENSMUST00000154864 (Phf6-002) 52912295-52955965 protein_coding
ENSMUST00000177780 (Phf6-005) 52924569-52940616 processed_transcript
ENSMUST00000179014 (Phf6-004) 52924571-52940635 processed_transcript
ENSMUSG00000073207 (Ccdc160)
coiled-coil domain containing 160
ENSMUST00000101588 (Ccdc160-001) 52791200-52799468 protein_coding
ENSMUSG00000081684 (Rps2-ps13)
ribosomal protein S2, pseudogene 13
ENSMUST00000117295 (Rps2-ps13-001) 52898588-52899469 processed_pseudogene
ENSMUSG00000082887 (Gm14607)
predicted gene 14607
ENSMUST00000119119 (Gm14607-001) 52878243-52878733 processed_pseudogene
ENSMUSG00000083683 (Gm6539)
predicted gene 6539
ENSMUST00000119157 (Gm6539-001) 52878792-52880189 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JW_0001ENSG00000156531ENST00000332070ENST00000370799ENST00000370800ENST00000370803ENSG00000203952ENST00000370809ENST00000517294ENSG00000214961ENST00000399325ENSG00000251962ENST00000516153CIL_0000JW_0002ENSMUSG00000025626ENSMUST00000078944ENSMUST00000101587ENSMUST00000154864ENSMUST00000177780ENSMUST00000179014ENSMUSG00000073207ENSMUST00000101588ENSMUSG00000081684ENSMUST00000117295ENSMUSG00000082887ENSMUST00000119119ENSMUSG00000083683ENSMUST00000119157
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JW_0001ENSG00000156531ENST00000332070ENST00000370799ENST00000370800ENST00000370803ENSG00000203952ENST00000370809ENST00000517294ENSG00000214961ENST00000399325ENSG00000251962ENST00000516153CIL_0000JW_0002ENSMUSG00000025626ENSMUST00000078944ENSMUST00000101587ENSMUST00000154864ENSMUST00000177780ENSMUSG00000073207ENSMUST00000101588ENSMUSG00000081684ENSMUST00000117295ENSMUSG00000082887ENSMUST00000119119ENSMUSG00000083683ENSMUST00000119157
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156531 ENST00000332070 N/A 0.514±0.00 0.570±0.00 2.516±0.91 1.317±0.49 1.727±1.38 0.461±0.17 1.346±0.00 1.194±1.05 1.008±0.39 N/A 2.614±1.20 0.466±0.02 1.454±0.37
ENST00000370799 N/A N/A 0.237±0.00 N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000370800 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.827±0.00 N/A N/A N/A 1.779±0.00
ENST00000370803 2.579±0.00 2.891±0.00 0.456±0.00 2.286±0.00 1.486±0.69 0.813±0.00 0.622±0.32 1.545±0.70 0.701±0.35 1.686±0.00 0.597±0.23 4.820±1.64 1.690±0.89 4.065±1.13
ENSG00000203952 ENST00000370809 0.084±0.00 N/A N/A 0.293±0.05 0.070±0.00 0.186±0.00 N/A 0.627±0.00 0.075±0.00 0.351±0.30 N/A 0.044±0.03 0.101±0.08 1.323±0.74
ENST00000517294 N/A 0.085±0.00 0.322±0.00 0.342±0.00 0.126±0.00 N/A 0.014±0.01 2.289±0.00 0.137±0.00 0.066±0.00 0.276±0.00 0.109±0.03 N/A 0.891±0.00
ENSG00000214961 ENST00000399325 N/A N/A N/A 0.009±0.00 N/A N/A 0.008±0.00 N/A N/A N/A N/A 0.025±0.00 N/A 0.018±0.00
ENSG00000251962 ENST00000516153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.653±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025626 ENSMUST00000078944 1.877±0.86 0.786±0.36 4.420±0.26 16.093±10.09 1.238±0.33 1.006±0.29 0.627±0.36 1.388±0.32 2.759±1.94 1.662±0.72 1.036±0.15 2.179±1.64 1.389±0.54 1.057±0.08
ENSMUST00000101587 N/A 0.118±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.02 N/A N/A
ENSMUST00000154864 N/A 0.441±0.05 N/A N/A 0.480±0.15 N/A N/A 0.207±0.00 0.227±0.02 0.553±0.00 N/A 0.758±0.28 0.277±0.00 3.358±0.00
ENSMUST00000177780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.755±0.00 5.958±0.04 23.713±0.00
ENSMUST00000179014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073207 ENSMUST00000101588 0.150±0.03 0.660±0.28 0.700±0.02 0.866±0.36 0.079±0.05 0.076±0.00 0.054±0.04 0.877±0.18 0.066±0.02 0.196±0.09 0.055±0.03 1.696±2.09 2.108±1.33 1.773±1.08
ENSMUSG00000081684 ENSMUST00000117295 0.058±0.02 0.342±0.16 0.515±0.37 0.070±0.04 0.181±0.10 0.166±0.06 0.038±0.00 0.076±0.03 0.198±0.11 0.092±0.04 0.074±0.03 0.249±0.16 9.477±18.62 0.121±0.00
ENSMUSG00000082887 ENSMUST00000119119 N/A N/A 0.021±0.00 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083683 ENSMUST00000119157 N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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