C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101639-ENSG00000168675 CGP 9606 18:12991362-13652755
GeneTranscriptPositionBiotype
ENSG00000101639 (CEP192)
centrosomal protein 192kDa 		ENST00000325971 (CEP192-201) 12991362-13125050 protein_coding
ENST00000430049 (CEP192-202) 13059182-13125034 protein_coding
ENST00000506447 (CEP192-001) 12991362-13125036 protein_coding
ENST00000507064 (CEP192-005) 12991377-13008631 nonsense_mediated_decay
ENST00000507254 (CEP192-006) 13068415-13092527 processed_transcript
ENST00000508150 (CEP192-014) 13087149-13095685 nonsense_mediated_decay
ENST00000508539 (CEP192-008) 13103509-13117612 processed_transcript
ENST00000510237 (CEP192-004) 13029813-13125050 nonsense_mediated_decay
ENST00000511820 (CEP192-010) 13029787-13124995 protein_coding
ENST00000513183 (CEP192-009) 13116404-13125030 processed_transcript
ENST00000513432 (CEP192-002) 13008500-13125052 nonsense_mediated_decay
ENST00000540847 (CEP192-007) 13073116-13125036 processed_transcript
ENST00000585938 (CEP192-013) 13056631-13059213 nonsense_mediated_decay
ENST00000589596 (CEP192-011) 12991362-13059314 protein_coding
ENST00000589993 (CEP192-012) 13059182-13125036 nonsense_mediated_decay
ENSG00000168675 (LDLRAD4)
low density lipoprotein receptor class A domain containing 4 		ENST00000359446 (LDLRAD4-002) 13278103-13652754 protein_coding
ENST00000361303 (LDLRAD4-006) 13620868-13652754 retained_intron
ENST00000399848 (LDLRAD4-001) 13218787-13652755 protein_coding
ENST00000435606 (LDLRAD4-007) 13620868-13652754 retained_intron
ENST00000585931 (LDLRAD4-004) 13611764-13646734 protein_coding
ENST00000586207 (LDLRAD4-015) 13542292-13645205 processed_transcript
ENST00000586222 (LDLRAD4-012) 13382554-13438332 protein_coding
ENST00000586765 (LDLRAD4-018) 13612619-13645659 protein_coding
ENST00000587440 (LDLRAD4-016) 13542407-13543214 processed_transcript
ENST00000587600 (LDLRAD4-014) 13465025-13491588 processed_transcript
ENST00000587757 (LDLRAD4-003) 13611464-13645777 protein_coding
ENST00000587905 (LDLRAD4-010) 13218026-13621143 protein_coding
ENST00000590115 (LDLRAD4-011) 13218760-13278376 retained_intron
ENST00000590308 (LDLRAD4-005) 13612029-13615748 processed_transcript
ENST00000590371 (LDLRAD4-009) 13217498-13387577 processed_transcript
ENST00000592657 (LDLRAD4-017) 13542916-13543623 processed_transcript
ENST00000592812 (LDLRAD4-019) 13612625-13616159 processed_transcript
ENST00000592991 (LDLRAD4-008) 13641758-13645712 protein_coding
ENST00000593236 (LDLRAD4-013) 13465015-13621270 protein_coding
ENSG00000263527 (MIR4526)
microRNA 4526 		ENST00000583168 (MIR4526-201) 13611114-13611200 miRNA
ENSG00000266146 (MIR5190)
microRNA 5190 		ENST00000581537 (MIR5190-201) 13459947-13460026 miRNA
ENSG00000267032 (RP11-807E13.2)
 ENST00000586304 (RP11-807E13.2-001) 13151637-13152689 processed_pseudogene
ENSG00000267136 (RP11-53B2.3)
 ENST00000585366 (RP11-53B2.3-001) 13514520-13522888 antisense
ENSG00000267177 (RP11-756J15.3)
 ENST00000592655 (RP11-756J15.3-001) 13234945-13236470 antisense
ENSG00000267239 (RP11-794M8.1)
 ENST00000586278 (RP11-794M8.1-001) 13203774-13216367 antisense
ENST00000589601 (RP11-794M8.1-002) 13214083-13216325 antisense
ENSG00000267286 (RP11-794M8.2)
 ENST00000593121 (RP11-794M8.2-001) 13183402-13185617 lincRNA
ENSG00000267366 (RP11-53B2.5)
 ENST00000589045 (RP11-53B2.5-001) 13500641-13501289 antisense
ENSG00000267393 (RP11-691H4.3)
 ENST00000588204 (RP11-691H4.3-001) 13362203-13366243 antisense
ENSG00000267503 (RP11-53B2.4)
 ENST00000590042 (RP11-53B2.4-001) 13561399-13565035 antisense
ENSG00000267529 (RP11-53B2.1)
 ENST00000590468 (RP11-53B2.1-001) 13471850-13472670 antisense
ENST00000624889 (RP11-53B2.1-002) 13471012-13472709 TEC
ENSG00000267656 (RP11-807E13.3)
 ENST00000586758 (RP11-807E13.3-001) 13139780-13140489 processed_pseudogene
ENSG00000267690 (LDLRAD4-AS1)
LDLRAD4 antisense RNA 1 		ENST00000588672 (LDLRAD4-AS1-001) 13419421-13427480 antisense
ENSG00000267694 (RP11-691H4.4)
 ENST00000585817 (RP11-691H4.4-001) 13461020-13470823 antisense
ENSG00000267702 (RP11-53B2.2)
 ENST00000587344 (RP11-53B2.2-001) 13486462-13490676 sense_intronic
ENSG00000272746 (RP11-53B2.6)
 ENST00000610087 (RP11-53B2.6-001) 13526078-13526688 sense_intronic
ENSG00000279020 (C18orf15)
chromosome 18 open reading frame 15 		ENST00000623680 (C18orf15-001) 13239543-13242076 TEC
ENSG00000279275 (RP11-756J15.2)
 ENST00000623585 (RP11-756J15.2-001) 13279415-13280110 TEC
CIL_0000LB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024542-ENSMUSG00000024544 CGP 10090 18:67800107-68255549
GeneTranscriptPositionBiotype
ENSMUSG00000024542 (Cep192)
centrosomal protein 192 		ENSMUST00000025425 (Cep192-201) 67800107-67885168 protein_coding
ENSMUSG00000024544 (Ldlrad4)
low density lipoprotein receptor class A domain containing 4 		ENSMUST00000063775 (Ldlrad4-201) 67933257-68255549 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LB_0001ENSG00000101639ENST00000325971ENST00000430049ENST00000506447ENST00000507064ENST00000507254ENST00000508150ENST00000508539ENST00000510237ENST00000511820ENST00000513183ENST00000513432ENST00000540847ENST00000585938ENST00000589596ENST00000589993ENSG00000168675ENST00000359446ENST00000361303ENST00000399848ENST00000435606ENST00000585931ENST00000586207ENST00000586222ENST00000586765ENST00000587440ENST00000587600ENST00000587757ENST00000587905ENST00000590115ENST00000590308ENST00000590371ENST00000592657ENST00000592812ENST00000592991ENST00000593236ENSG00000263527ENST00000583168ENSG00000266146ENST00000581537ENSG00000267032ENST00000586304ENSG00000267136ENST00000585366ENSG00000267177ENST00000592655ENSG00000267239ENST00000586278ENST00000589601ENSG00000267286ENST00000593121ENSG00000267366ENST00000589045ENSG00000267393ENST00000588204ENSG00000267503ENST00000590042ENSG00000267529ENST00000590468ENST00000624889ENSG00000267656ENST00000586758ENSG00000267690ENST00000588672ENSG00000267694ENST00000585817ENSG00000267702ENST00000587344ENSG00000272746ENST00000610087ENSG00000279020ENST00000623680ENSG00000279275ENST00000623585CIL_0000LB_0002ENSMUSG00000024542ENSMUST00000025425ENSMUSG00000024544ENSMUST00000063775
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LB_0001ENSG00000101639ENST00000325971ENST00000506447ENST00000510237ENST00000511820ENST00000513432ENST00000540847ENST00000589596ENST00000589993ENSG00000168675ENST00000359446ENST00000361303ENST00000399848ENST00000585931ENST00000586222ENST00000590308ENSG00000263527ENST00000583168ENSG00000266146ENST00000581537ENSG00000267032ENST00000586304ENSG00000267136ENST00000585366ENSG00000267177ENST00000592655ENSG00000267239ENST00000586278ENST00000589601ENSG00000267286ENST00000593121ENSG00000267366ENST00000589045ENSG00000267393ENST00000588204ENSG00000267503ENST00000590042ENSG00000267529ENST00000590468ENST00000624889ENSG00000267656ENST00000586758ENSG00000267690ENST00000588672ENSG00000267694ENST00000585817ENSG00000267702ENST00000587344ENSG00000272746ENST00000610087ENSG00000279020ENST00000623680ENSG00000279275ENST00000623585CIL_0000LB_0002ENSMUSG00000024542ENSMUST00000025425ENSMUSG00000024544ENSMUST00000063775
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101639 ENST00000325971 N/A 0.913±0.00 1.100±0.00 N/A N/A N/A 1.421±0.00 N/A N/A 0.770±0.00 N/A 0.683±0.00 N/A N/A
ENST00000430049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506447 0.149±0.00 N/A N/A 0.639±0.25 3.412±0.00 0.853±0.56 N/A N/A 1.440±1.33 0.907±0.00 0.782±0.00 2.840±2.83 0.279±0.11 1.475±0.90
ENST00000507064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510237 0.172±0.00 0.348±0.00 N/A 0.409±0.00 0.212±0.00 N/A N/A N/A N/A N/A 0.322±0.00 N/A N/A N/A
ENST00000511820 N/A N/A N/A N/A 0.346±0.00 0.243±0.00 N/A N/A 0.123±0.00 0.090±0.00 N/A 0.985±0.06 0.448±0.09 2.281±1.35
ENST00000513183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513432 N/A 0.253±0.00 0.410±0.00 N/A 0.900±0.00 N/A N/A 0.253±0.00 N/A N/A N/A 0.467±0.00 N/A N/A
ENST00000540847 N/A N/A N/A N/A 0.526±0.00 0.410±0.00 1.926±0.00 0.817±0.00 0.186±0.00 0.264±0.00 N/A 2.592±0.51 0.544±0.08 2.071±0.00
ENST00000585938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589596 N/A N/A 1.367±0.00 N/A N/A 2.016±0.00 N/A 1.569±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589993 0.430±0.00 0.992±0.00 N/A 0.540±0.00 N/A N/A N/A 1.385±0.00 0.344±0.00 0.184±0.00 0.199±0.00 1.376±0.39 0.737±0.05 2.613±0.68
ENSG00000168675 ENST00000359446 0.917±0.00 1.282±0.00 0.878±0.00 3.524±0.00 2.006±0.43 0.913±0.00 2.243±0.00 0.687±0.00 0.783±0.00 N/A 0.955±0.63 0.979±0.00 0.904±0.37 2.753±0.00
ENST00000361303 N/A N/A N/A N/A 0.858±0.00 0.852±0.00 N/A N/A N/A N/A N/A N/A 0.413±0.00 N/A
ENST00000399848 0.610±0.00 N/A N/A N/A 0.700±0.00 0.308±0.00 0.922±0.53 0.450±0.00 N/A 0.728±0.00 N/A N/A 0.471±0.00 0.578±0.00
ENST00000435606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585931 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.718±0.00 N/A N/A 2.037±0.00 N/A
ENST00000586207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586222 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.393±0.00 N/A 3.139±0.00 N/A N/A
ENST00000586765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590308 N/A N/A N/A 5.858±3.12 N/A N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A 0.767±0.00
ENST00000590371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263527 ENST00000583168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.223±0.00
ENSG00000266146 ENST00000581537 N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000267032 ENST00000586304 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A 0.017±0.00
ENSG00000267136 ENST00000585366 0.010±0.00 0.203±0.00 0.401±0.00 0.122±0.07 0.137±0.06 0.037±0.00 0.213±0.10 0.226±0.20 0.199±0.17 0.558±0.53 0.562±0.00 0.217±0.20 0.007±0.00 0.054±0.00
ENSG00000267177 ENST00000592655 3.813±0.00 4.815±0.00 N/A 2.778±0.00 3.130±0.00 0.405±0.00 0.641±0.00 3.579±0.00 1.405±0.00 1.766±0.00 0.751±0.00 12.844±11.63 N/A 2.230±0.20
ENSG00000267239 ENST00000586278 0.104±0.00 0.273±0.00 N/A 0.108±0.00 0.176±0.00 0.137±0.00 0.080±0.00 0.065±0.00 0.045±0.00 0.230±0.00 N/A 0.005±0.00 N/A 0.116±0.02
ENST00000589601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENSG00000267286 ENST00000593121 N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A 0.096±0.00 N/A N/A 0.094±0.00
ENSG00000267366 ENST00000589045 N/A N/A N/A 0.438±0.00 1.252±0.00 0.469±0.45 0.065±0.04 0.093±0.00 0.480±0.00 0.460±0.23 N/A 0.175±0.10 0.089±0.00 0.067±0.02
ENSG00000267393 ENST00000588204 N/A N/A 0.752±0.00 N/A 0.069±0.00 0.135±0.00 0.745±0.00 0.103±0.07 1.091±0.00 N/A 3.008±0.00 0.083±0.00 N/A N/A
ENSG00000267503 ENST00000590042 N/A 0.054±0.00 N/A 0.019±0.00 N/A 0.806±0.00 0.083±0.00 0.710±0.00 N/A 0.282±0.00 N/A 0.120±0.03 0.078±0.00 0.238±0.00
ENSG00000267529 ENST00000590468 N/A 0.049±0.00 N/A 0.271±0.00 N/A 1.091±0.00 N/A N/A N/A N/A N/A 0.364±0.24 0.042±0.00 N/A
ENST00000624889 0.010±0.00 0.014±0.00 0.164±0.00 0.040±0.02 0.332±0.24 1.326±0.00 0.325±0.27 0.110±0.00 0.504±0.00 N/A N/A 0.152±0.12 0.034±0.00 0.076±0.00
ENSG00000267656 ENST00000586758 N/A 0.053±0.00 N/A N/A N/A N/A 0.024±0.00 N/A 0.120±0.00 N/A N/A 0.033±0.00 0.095±0.00 N/A
ENSG00000267690 ENST00000588672 N/A 0.108±0.00 0.120±0.00 0.089±0.00 0.013±0.00 0.290±0.28 0.114±0.10 0.324±0.00 0.139±0.04 0.150±0.12 0.317±0.26 0.046±0.00 0.074±0.05 0.057±0.01
ENSG00000267694 ENST00000585817 N/A 0.044±0.00 N/A N/A N/A 0.881±0.00 0.163±0.00 N/A N/A N/A N/A N/A 0.420±0.00 0.304±0.00
ENSG00000267702 ENST00000587344 0.019±0.00 0.269±0.00 0.604±0.00 0.152±0.10 0.808±0.69 0.623±0.56 0.247±0.10 0.622±0.50 0.537±0.47 0.853±0.82 0.208±0.16 0.076±0.05 0.025±0.00 0.218±0.09
ENSG00000272746 ENST00000610087 0.055±0.00 0.376±0.00 N/A 0.046±0.01 0.375±0.19 0.733±0.00 0.569±0.25 0.536±0.48 0.255±0.16 0.174±0.14 0.620±0.00 0.113±0.06 0.260±0.00 0.172±0.09
ENSG00000279020 ENST00000623680 0.207±0.00 0.484±0.00 0.097±0.00 0.210±0.06 0.242±0.08 0.165±0.04 0.117±0.03 0.167±0.04 0.123±0.02 0.192±0.00 0.158±0.07 N/A 0.027±0.00 0.152±0.00
ENSG00000279275 ENST00000623585 N/A 0.050±0.00 N/A 0.077±0.01 0.183±0.14 0.483±0.36 0.109±0.00 1.983±0.00 1.067±0.00 1.197±0.00 N/A 0.233±0.00 N/A 0.046±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024542 ENSMUST00000025425 2.015±0.71 1.274±0.59 1.498±0.26 3.357±2.31 1.971±0.65 2.046±0.65 0.657±0.19 1.080±0.22 3.267±3.11 2.014±0.64 0.192±0.09 2.479±1.05 4.300±2.07 5.298±1.57
ENSMUSG00000024544 ENSMUST00000063775 10.356±4.61 7.170±1.02 8.258±0.00 2.960±0.07 6.646±1.15 5.852±2.83 7.042±0.50 9.999±2.69 3.299±1.24 10.390±1.67 1.724±0.68 12.207±2.99 0.504±0.47 1.116±0.13

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