C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012060-ENSDARG00000036109 CGP 7955 19:24905332-24970423
GeneTranscriptPositionBiotype
ENSDARG00000012060 (thbs3b)
thrombospondin 3b 		ENSDART00000043133 (thbs3b-201) 24905332-24929086 protein_coding
ENSDART00000090825 (thbs3b-001) 24905358-24929059 protein_coding
ENSDARG00000036109 (mtx1b)
metaxin 1b 		ENSDART00000052422 (mtx1b-001) 24934249-24970423 protein_coding
CIL_0000LQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077641-ENSDARG00000025500 CGP 7955 16:45738290-45803244
GeneTranscriptPositionBiotype
ENSDARG00000025500 (mtx1a)
metaxin 1a 		ENSDART00000113714 (mtx1a-001) 45776911-45803244 protein_coding
ENSDARG00000077641 (thbs3a)
thrombospondin 3a 		ENSDART00000057305 (thbs3a-001) 45738290-45771384 protein_coding
CIL_0000LQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169231-ENSG00000173171 CGP 9606 1:155195588-155213824
GeneTranscriptPositionBiotype
ENSG00000169231 (THBS3)
thrombospondin 3 		ENST00000368378 (THBS3-001) 155195588-155207897 protein_coding
ENST00000428962 (THBS3-010) 155197897-155207899 nonsense_mediated_decay
ENST00000457183 (THBS3-009) 155195666-155207917 protein_coding
ENST00000460050 (THBS3-006) 155200899-155203305 processed_transcript
ENST00000465596 (THBS3-005) 155198071-155200049 processed_transcript
ENST00000469769 (THBS3-004) 155195845-155197622 retained_intron
ENST00000486260 (THBS3-007) 155200456-155209051 processed_transcript
ENST00000496332 (THBS3-008) 155200617-155202254 retained_intron
ENST00000498500 (THBS3-003) 155195588-155196442 retained_intron
ENST00000541576 (THBS3-201) 155195590-155207981 protein_coding
ENST00000541990 (THBS3-202) 155195791-155207899 protein_coding
ENSG00000236263 (RP11-263K19.6)
 ENST00000455788 (RP11-263K19.6-001) 155211151-155213819 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LQ_0001ENSDARG00000012060ENSDART00000043133ENSDART00000090825ENSDARG00000036109ENSDART00000052422CIL_0000LQ_0002ENSDARG00000025500ENSDART00000113714ENSDARG00000077641ENSDART00000057305CIL_0000LQ_0003ENSG00000169231ENST00000368378ENST00000428962ENST00000457183ENST00000460050ENST00000465596ENST00000469769ENST00000486260ENST00000496332ENST00000498500ENST00000541576ENST00000541990ENSG00000236263ENST00000455788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LQ_0001ENSDARG00000012060ENSDART00000043133ENSDART00000090825ENSDARG00000036109ENSDART00000052422CIL_0000LQ_0002ENSDARG00000025500ENSDART00000113714ENSDARG00000077641ENSDART00000057305CIL_0000LQ_0003ENSG00000169231ENST00000368378ENST00000457183ENST00000460050ENST00000469769ENST00000498500ENST00000541576ENST00000541990ENSG00000236263ENST00000455788
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012060 ENSDART00000043133 N/A N/A N/A 0.313±0.17 N/A N/A 0.222±0.13 N/A 0.028±0.00 N/A 0.003±0.00 N/A N/A N/A
ENSDART00000090825 N/A N/A N/A N/A N/A N/A 0.302±0.18 0.573±0.00 N/A N/A 0.017±0.00 N/A N/A N/A
ENSDARG00000036109 ENSDART00000052422 N/A N/A N/A 1.193±0.85 N/A N/A 1.427±1.14 3.467±0.00 1.213±0.00 N/A 1.370±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000025500 ENSDART00000113714 N/A N/A N/A 4.535±0.06 N/A N/A 1.764±1.21 0.337±0.00 0.602±0.00 N/A 0.771±0.00 N/A N/A N/A
ENSDARG00000077641 ENSDART00000057305 N/A N/A N/A 0.291±0.15 N/A N/A 41.746±27.18 3.724±0.00 0.693±0.00 N/A 6.346±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169231 ENST00000368378 2.596±0.00 7.841±0.00 N/A N/A 7.532±0.00 2.469±1.76 N/A 2.844±0.00 1.313±0.00 6.222±0.00 N/A 9.084±5.29 4.298±0.97 8.341±2.77
ENST00000428962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457183 1.918±0.00 N/A N/A N/A 5.614±0.00 3.089±0.00 N/A 2.663±0.00 N/A N/A N/A N/A N/A 4.281±0.00
ENST00000460050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.698±0.00 N/A N/A N/A
ENST00000465596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.214±0.00 N/A N/A N/A
ENST00000486260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.570±0.00 N/A N/A 17.294±0.00
ENST00000541576 N/A N/A N/A 0.519±0.00 N/A N/A 1.916±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000541990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.049±0.00 N/A 9.341±0.00
ENSG00000236263 ENST00000455788 N/A N/A N/A 14.205±0.00 N/A N/A N/A N/A 5.271±0.00 N/A 2.405±0.00 N/A 15.794±2.58 N/A

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