C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thrombospondin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469769 THBS3-004 ENSG00000169231 9606 - 1:155195845-155197622 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000469769
Transcript ID Muscle
ENST00000469769 1.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LQ CIL_0000LQ_0003 CGP 1:155195588-155213824

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126372 Thbs3-009 retained_intron Mus_musculus 0 551
ENSMUST00000136881 Thbs3-007 nonsense_mediated_decay Mus_musculus 0 545
ENSMUST00000119084 Thbs3-003 protein_coding Mus_musculus 0 545
ENSMUST00000029682 Thbs3-001 protein_coding Mus_musculus 0 545
ENSMUST00000153129 Thbs3-010 retained_intron Mus_musculus 0 313
ENSMUST00000126315 Thbs3-002 retained_intron Mus_musculus 0 313
ENSMUST00000155924 Thbs3-008 retained_intron Mus_musculus 0 237
ENSMUST00000144980 Thbs3-006 retained_intron Mus_musculus 0 237

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