C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002614-ENSDARG00000036715 CGP 7955 19:11898214-11942505
GeneTranscriptPositionBiotype
ENSDARG00000002614 (pip5k1aa)
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a 		ENSDART00000078358 (pip5k1aa-001) 11898214-11921647 protein_coding
ENSDARG00000036715 (psmd4a)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 4a 		ENSDART00000104063 (psmd4a-201) 11932636-11942505 protein_coding

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CIL_0000LW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024642-ENSDARG00000023279 CGP 7955 16:11320145-11371976
GeneTranscriptPositionBiotype
ENSDARG00000023279 (psmd4b)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 4b 		ENSDART00000020654 (psmd4b-001) 11356309-11371976 protein_coding
ENSDARG00000024642 (pip5k1ab)
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b 		ENSDART00000020859 (pip5k1ab-001) 11320145-11352618 protein_coding

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CIL_0000LW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143398-ENSG00000159352 CGP 9606 1:151197949-151267479
GeneTranscriptPositionBiotype
ENSG00000143398 (PIP5K1A)
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 		ENST00000349792 (PIP5K1A-001) 151198551-151249536 protein_coding
ENST00000368888 (PIP5K1A-003) 151198575-151247888 protein_coding
ENST00000368890 (PIP5K1A-002) 151198553-151249531 protein_coding
ENST00000409426 (PIP5K1A-015) 151198552-151249504 protein_coding
ENST00000418435 (PIP5K1A-004) 151213517-151231801 protein_coding
ENST00000424999 (PIP5K1A-014) 151198554-151216000 protein_coding
ENST00000441902 (PIP5K1A-016) 151198553-151248149 protein_coding
ENST00000447555 (PIP5K1A-011) 151197949-151231761 protein_coding
ENST00000454769 (PIP5K1A-017) 151198725-151227361 nonsense_mediated_decay
ENST00000460157 (PIP5K1A-013) 151236634-151238605 retained_intron
ENST00000461816 (PIP5K1A-009) 151224139-151232307 retained_intron
ENST00000464105 (PIP5K1A-007) 151233622-151236747 processed_transcript
ENST00000468772 (PIP5K1A-005) 151223880-151232345 retained_intron
ENST00000481713 (PIP5K1A-006) 151227267-151232641 retained_intron
ENST00000486048 (PIP5K1A-012) 151232252-151234367 processed_transcript
ENST00000486866 (PIP5K1A-008) 151236634-151240291 retained_intron
ENST00000489625 (PIP5K1A-010) 151242112-151248483 retained_intron
ENSG00000159352 (PSMD4)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 		ENST00000368881 (PSMD4-002) 151254709-151267459 protein_coding
ENST00000368884 (PSMD4-001) 151254703-151267479 protein_coding
ENST00000427779 (PSMD4-013) 151266038-151267460 nonsense_mediated_decay
ENST00000437736 (PSMD4-014) 151259063-151265609 protein_coding
ENST00000445776 (PSMD4-008) 151264888-151267466 protein_coding
ENST00000453615 (PSMD4-010) 151266544-151267460 protein_coding
ENST00000461434 (PSMD4-012) 151254758-151262910 retained_intron
ENST00000462970 (PSMD4-004) 151254763-151265588 retained_intron
ENST00000469786 (PSMD4-011) 151262560-151264939 processed_transcript
ENST00000470396 (PSMD4-007) 151266308-151266725 retained_intron
ENST00000476855 (PSMD4-006) 151254769-151267232 retained_intron
ENST00000491857 (PSMD4-009) 151265244-151266098 retained_intron

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LW_0001ENSDARG00000002614ENSDART00000078358ENSDARG00000036715ENSDART00000104063CIL_0000LW_0002ENSDARG00000023279ENSDART00000020654ENSDARG00000024642ENSDART00000020859CIL_0000LW_0003ENSG00000143398ENST00000349792ENST00000368888ENST00000368890ENST00000409426ENST00000418435ENST00000424999ENST00000441902ENST00000447555ENST00000454769ENST00000460157ENST00000461816ENST00000464105ENST00000468772ENST00000481713ENST00000486048ENST00000486866ENST00000489625ENSG00000159352ENST00000368881ENST00000368884ENST00000427779ENST00000437736ENST00000445776ENST00000453615ENST00000461434ENST00000462970ENST00000469786ENST00000470396ENST00000476855ENST00000491857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LW_0001ENSDARG00000002614ENSDART00000078358ENSDARG00000036715ENSDART00000104063CIL_0000LW_0002ENSDARG00000023279ENSDART00000020654ENSDARG00000024642ENSDART00000020859CIL_0000LW_0003ENSG00000143398ENST00000349792ENST00000368888ENST00000368890ENST00000409426ENST00000486048ENST00000489625ENSG00000159352ENST00000368881ENST00000368884ENST00000445776ENST00000491857
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002614 ENSDART00000078358 N/A N/A N/A 1.669±1.14 N/A N/A 1.616±1.17 0.986±0.06 0.322±0.00 N/A 0.985±0.00 N/A N/A N/A
ENSDARG00000036715 ENSDART00000104063 N/A N/A N/A 15.602±2.79 N/A N/A 24.181±6.41 4.848±5.55 2.453±0.00 N/A 30.351±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023279 ENSDART00000020654 N/A N/A N/A 15.639±7.19 N/A N/A 35.163±27.47 47.300±26.79 1.900±0.00 N/A 23.249±0.00 N/A N/A N/A
ENSDARG00000024642 ENSDART00000020859 N/A N/A N/A 4.079±2.44 N/A N/A 2.161±0.03 3.736±0.00 0.447±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143398 ENST00000349792 2.634±0.00 N/A N/A 1.769±0.37 1.854±0.00 2.821±0.00 1.435±0.70 2.181±0.00 0.789±0.00 1.927±0.21 3.032±0.00 3.953±2.69 7.327±1.48 4.019±0.00
ENST00000368888 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.866±0.00 N/A N/A N/A N/A
ENST00000368890 N/A N/A N/A 2.373±0.00 N/A N/A 0.614±0.00 N/A N/A N/A 1.696±0.00 1.993±0.00 N/A N/A
ENST00000409426 3.407±0.00 4.909±0.00 1.359±0.00 3.792±0.00 2.292±1.45 4.639±0.00 5.612±0.00 2.057±0.00 1.206±0.40 4.093±3.08 4.411±0.00 4.176±3.05 4.573±0.59 12.463±0.70
ENST00000418435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486048 N/A N/A 13.086±0.00 N/A N/A N/A N/A 4.468±0.00 N/A N/A N/A N/A N/A N/A
ENST00000486866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489625 N/A N/A 4.217±0.00 N/A 6.170±0.00 5.751±0.00 N/A 2.993±0.00 5.557±0.00 3.477±0.00 N/A 7.770±0.00 N/A N/A
ENSG00000159352 ENST00000368881 12.328±0.00 13.758±0.00 N/A 13.259±0.00 23.293±0.00 17.571±0.00 16.479±0.00 22.029±0.00 8.696±0.00 14.013±0.00 24.571±0.00 15.404±5.67 N/A 17.357±0.00
ENST00000368884 25.269±0.00 29.201±0.00 7.689±0.00 40.306±6.42 23.104±3.12 27.519±13.76 16.667±4.48 21.339±2.72 26.786±2.01 16.049±2.50 83.267±43.05 51.065±23.39 84.209±12.08 73.652±16.56
ENST00000427779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445776 N/A 25.392±0.00 N/A N/A 16.330±0.00 16.111±0.00 N/A 12.575±0.00 10.907±0.00 17.891±0.00 N/A 75.046±0.00 32.638±0.00 34.035±0.00
ENST00000453615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491857 N/A N/A N/A N/A N/A N/A 8.824±0.00 N/A N/A N/A N/A N/A N/A N/A

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