C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445776 PSMD4-008 ENSG00000159352 9606 + 1:151264888-151267466 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000445776
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000445776 25.392±0.00 16.330±0.00 16.111±0.00 12.575±0.00 10.907±0.00 17.891±0.00 75.046±0.00 32.638±0.00 34.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LW CIL_0000LW_0003 CGP 1:151197949-151267479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140348 Psmd4-008 protein_coding Mus_musculus 0 704
ENSMUST00000107237 Psmd4-002 protein_coding Mus_musculus 0 619
ENSMUST00000071664 Psmd4-001 protein_coding Mus_musculus 0 579
ENSMUST00000117355 Psmd4-004 protein_coding Mus_musculus 0 326
ENSMUST00000136868 Psmd4-005 retained_intron Mus_musculus 0 263
ENSMUST00000140280 Psmd4-003 retained_intron Mus_musculus 1e-30 137

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