C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000OS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006602-ENSDARG00000022841 CGP 7955 17:5843715-5966650
GeneTranscriptPositionBiotype
ENSDARG00000006602 (chrna2a)
cholinergic receptor, nicotinic, alpha polypeptide 2a (neuronal)
ENSDART00000033947 (chrna2a-001) 5843715-5865654 protein_coding
ENSDARG00000022841 (ptk2ba)
protein tyrosine kinase 2 beta, a
ENSDART00000028407 (ptk2ba-201) 5878210-5962657 protein_coding
ENSDART00000151908 (ptk2ba-001) 5877960-5966650 protein_coding
CIL_0000OS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057025-ENSDARG00000039577 CGP 7955 20:19865780-19936291
GeneTranscriptPositionBiotype
ENSDARG00000039577 (ptk2bb)
protein tyrosine kinase 2 beta, b
ENSDART00000057819 (ptk2bb-001) 19899539-19936291 protein_coding
ENSDART00000149009 (ptk2bb-002) 19923903-19936263 nonsense_mediated_decay
ENSDARG00000057025 (chrna2b)
cholinergic receptor, nicotinic, alpha polypeptide 2b (neuronal)
ENSDART00000079613 (chrna2b-201) 19886703-19895600 protein_coding
ENSDART00000136317 (chrna2b-001) 19865780-19896675 protein_coding
CIL_0000OS_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022041-ENSMUSG00000059456 CGP 10090 14:66140960-66281052
GeneTranscriptPositionBiotype
ENSMUSG00000022041 (Chrna2)
cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
ENSMUST00000022620 (Chrna2-001) 66140960-66152948 protein_coding
ENSMUSG00000059456 (Ptk2b)
PTK2 protein tyrosine kinase 2 beta
ENSMUST00000022622 (Ptk2b-002) 66153257-66281052 protein_coding
ENSMUST00000089250 (Ptk2b-001) 66153262-66281052 protein_coding
ENSMUST00000111121 (Ptk2b-007) 66153844-66280982 protein_coding
ENSMUST00000127083 (Ptk2b-003) 66172741-66280992 retained_intron
ENSMUST00000136216 (Ptk2b-006) 66153267-66160678 retained_intron
ENSMUST00000148104 (Ptk2b-004) 66156281-66163906 retained_intron
ENSMUST00000154865 (Ptk2b-005) 66153262-66170282 protein_coding
ENSMUST00000178730 (Ptk2b-201) 66153258-66213552 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OS_0001ENSDARG00000006602ENSDART00000033947ENSDARG00000022841ENSDART00000028407ENSDART00000151908CIL_0000OS_0002ENSDARG00000039577ENSDART00000057819ENSDART00000149009ENSDARG00000057025ENSDART00000079613ENSDART00000136317CIL_0000OS_0003ENSMUSG00000022041ENSMUST00000022620ENSMUSG00000059456ENSMUST00000022622ENSMUST00000089250ENSMUST00000111121ENSMUST00000127083ENSMUST00000136216ENSMUST00000148104ENSMUST00000154865ENSMUST00000178730
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OS_0001ENSDARG00000006602ENSDART00000033947ENSDARG00000022841ENSDART00000028407ENSDART00000151908CIL_0000OS_0002ENSDARG00000039577ENSDART00000057819ENSDARG00000057025ENSDART00000079613ENSDART00000136317CIL_0000OS_0003ENSMUSG00000022041ENSMUST00000022620ENSMUSG00000059456ENSMUST00000022622ENSMUST00000089250ENSMUST00000111121ENSMUST00000136216ENSMUST00000148104ENSMUST00000154865ENSMUST00000178730
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006602 ENSDART00000033947 N/A N/A N/A 1.312±0.18 N/A N/A 0.053±0.03 0.080±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000022841 ENSDART00000028407 N/A N/A N/A 0.576±0.30 N/A N/A 0.980±0.07 1.794±0.00 0.104±0.00 N/A N/A N/A N/A N/A
ENSDART00000151908 N/A N/A N/A 0.540±0.41 N/A N/A 0.357±0.10 N/A N/A N/A 1.195±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039577 ENSDART00000057819 N/A N/A N/A 0.070±0.03 N/A N/A 0.141±0.09 0.936±0.52 N/A N/A 0.070±0.00 N/A N/A N/A
ENSDART00000149009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057025 ENSDART00000079613 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.132±0.00 N/A 0.125±0.00 N/A N/A N/A
ENSDART00000136317 N/A N/A N/A 1.470±1.10 N/A N/A N/A 0.236±0.16 N/A N/A 0.065±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022041 ENSMUST00000022620 0.175±0.14 0.278±0.19 0.082±0.01 0.106±0.00 0.483±0.09 0.069±0.03 0.370±0.12 0.104±0.03 0.708±0.64 0.063±0.02 0.166±0.07 1.379±0.75 0.140±0.06 0.623±0.28
ENSMUSG00000059456 ENSMUST00000022622 7.787±0.60 1.810±0.32 12.777±1.46 0.207±0.00 8.588±1.41 13.562±2.27 2.045±0.09 13.455±0.78 4.341±3.12 3.352±1.49 N/A 10.773±2.45 2.693±0.32 1.323±0.15
ENSMUST00000089250 3.382±0.04 0.481±0.00 4.146±0.00 0.057±0.01 7.648±2.96 N/A N/A N/A 3.601±0.64 3.634±1.45 0.720±0.60 N/A N/A N/A
ENSMUST00000111121 N/A 0.432±0.00 N/A 42.493±42.32 N/A 2.779±0.00 N/A N/A N/A 1.872±0.00 N/A 5.946±3.97 3.023±1.67 1.785±0.00
ENSMUST00000127083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.156±0.15 N/A N/A N/A
ENSMUST00000148104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.04 N/A N/A N/A
ENSMUST00000154865 N/A N/A 9.516±0.00 0.174±0.00 7.598±0.00 6.328±0.00 1.391±0.00 8.099±1.05 2.234±0.65 4.402±0.75 0.089±0.01 N/A 1.508±0.25 N/A
ENSMUST00000178730 N/A N/A 11.331±0.00 91.754±0.00 2.649±0.00 N/A N/A N/A 1.515±0.00 N/A 0.207±0.12 19.545±6.35 4.624±3.60 2.841±1.21

Loading