| Transcript ID | Brain | Heart | Kidney |
|---|---|---|---|
| ENSDART00000033947 | 1.312±0.18 | 0.053±0.03 | 0.080±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | cholinergic receptor, nicotinic, alpha polypeptide 2a (neuronal) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000033947  |
chrna2a-001 |
ENSDARG00000006602 |
7955 | + |
17:5843715-5865654  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000P3 | CIL_0000P3_0001 | CGP | 17:5780077-5865654 |
| CIL_0000OS | CIL_0000OS_0001 | CGP | 17:5843715-5966650 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004889 | IEA | acetylcholine-activated cation-selective channel activity |
| GO:0005216 | IEA | ion channel activity |
| GO:0005230 | IEA | extracellular ligand-gated ion channel activity |
| GO:0005886 | IEA | plasma membrane |
| GO:0005892 | IDA | acetylcholine-gated channel complex |
| GO:0006810 | IEA | transport |
| GO:0006811 | IEA | ion transport |
| GO:0015464 | IDA | acetylcholine receptor activity |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral to membrane |
| GO:0030054 | IEA | cell junction |
| GO:0045202 | IEA | synapse |
| GO:0045211 | IEA | postsynaptic membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000022620
|
Chrna2-001 | protein_coding | Mus_musculus | 0 | 688 |
|
ENSMUST00000029562
|
Chrnb2-201 | protein_coding | Mus_musculus | 3e-30 | 139 |
|
ENSMUST00000067120
|
Chrna4-001 | protein_coding | Mus_musculus | 0 | 492 |
|
ENSMUST00000108851
|
Chrna4-002 | protein_coding | Mus_musculus | 0 | 492 |
|
ENSMUST00000135766
|
Chrna4-004 | nonsense_mediated_decay | Mus_musculus | 6e-24 | 115 |
|
ENST00000240132
|
CHRNA2-004 | protein_coding | Homo_sapiens | 0 | 719 |
|
ENST00000368476
|
CHRNB2-001 | protein_coding | Homo_sapiens | 8e-26 | 124 |
|
ENST00000370263
|
CHRNA4-001 | protein_coding | Homo_sapiens | 0 | 623 |
|
ENST00000407991
|
CHRNA2-201 | protein_coding | Homo_sapiens | 0 | 752 |
|
ENST00000463705
|
CHRNA4-002 | processed_transcript | Homo_sapiens | 0 | 497 |
|
ENST00000467563
|
CHRNA4-004 | processed_transcript | Homo_sapiens | 0 | 556 |
|
ENST00000498043
|
CHRNA4-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 497 |
|
ENST00000520933
|
CHRNA2-001 | protein_coding | Homo_sapiens | 0 | 752 |
|
ENST00000522008
|
CHRNA2-012 | retained_intron | Homo_sapiens | 0 | 488 |
|
ENST00000523529
|
CHRNA2-006 | retained_intron | Homo_sapiens | 0 | 752 |
|
ENST00000523695
|
CHRNA2-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 436 |
|
ENST00000615287
|
CHRNA4-201 | protein_coding | Homo_sapiens | 0 | 497 |
