C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000001968-ENSDARG00000043697 CGP 7955 8:7220902-7436536
GeneTranscriptPositionBiotype
ENSDARG00000001968 (dock5)
dedicator of cytokinesis 5 		ENSDART00000015126 (dock5-201) 7220953-7369093 protein_coding
ENSDART00000135834 (dock5-001) 7220902-7395237 protein_coding
ENSDARG00000081857 (CU571327.1)
 ENSDART00000118151 (CU571327.1-201) 7345526-7345617 miRNA

Danio rerio Ensembl (Zv9)

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CIL_0000PH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044447-ENSMUSG00000022054 CGP 10090 14:67751928-68124846
GeneTranscriptPositionBiotype
ENSMUSG00000022054 (Nefm)
neurofilament, medium polypeptide 		ENSMUST00000022638 (Nefm-001) 68119283-68124846 protein_coding
ENSMUST00000111089 (Nefm-002) 68082590-68124846 protein_coding
ENSMUSG00000022055 (Nefl)
neurofilament, light polypeptide 		ENSMUST00000022639 (Nefl-001) 68083863-68089095 protein_coding
ENSMUSG00000044447 (Dock5)
dedicator of cytokinesis 5 		ENSMUST00000039135 (Dock5-201) 67751928-67933572 protein_coding
ENSMUSG00000098866 (Mir6539)
microRNA 6539 		ENSMUST00000183732 (Mir6539-201) 67859636-67859745 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PH_0001ENSDARG00000001968ENSDART00000015126ENSDART00000135834ENSDARG00000081857ENSDART00000118151CIL_0000PH_0002ENSMUSG00000022054ENSMUST00000022638ENSMUST00000111089ENSMUSG00000022055ENSMUST00000022639ENSMUSG00000044447ENSMUST00000039135ENSMUSG00000098866ENSMUST00000183732
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PH_0001ENSDARG00000001968ENSDART00000015126ENSDART00000135834ENSDARG00000081857ENSDART00000118151CIL_0000PH_0002ENSMUSG00000022054ENSMUST00000022638ENSMUST00000111089ENSMUSG00000022055ENSMUST00000022639ENSMUSG00000044447ENSMUST00000039135ENSMUSG00000098866ENSMUST00000183732
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001968 ENSDART00000015126 N/A N/A N/A 0.235±0.02 N/A N/A 0.175±0.00 N/A N/A N/A 0.030±0.00 N/A N/A N/A
ENSDART00000135834 N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A 0.128±0.00 N/A N/A N/A N/A N/A
ENSDARG00000081857 ENSDART00000118151 N/A N/A N/A 244.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022054 ENSMUST00000022638 0.011±0.00 0.422±0.03 0.227±0.04 55.034±45.39 0.039±0.01 0.829±0.04 0.075±0.03 0.153±0.08 0.035±0.04 0.039±0.00 0.017±0.00 0.032±0.01 0.125±0.06 0.066±0.06
ENSMUST00000111089 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A 0.029±0.00
ENSMUSG00000022055 ENSMUST00000022639 0.022±0.01 2.070±1.42 0.311±0.02 79.788±47.33 0.031±0.01 2.977±0.24 0.230±0.04 0.640±0.31 0.059±0.08 0.023±0.01 0.010±0.00 0.041±0.02 0.171±0.15 0.069±0.01
ENSMUSG00000044447 ENSMUST00000039135 1.856±0.31 1.243±0.27 3.022±1.14 0.472±0.22 2.446±0.71 5.276±1.30 1.138±0.20 2.758±0.35 0.985±0.50 2.734±0.11 0.086±0.02 3.991±1.06 10.593±4.95 0.971±0.55
ENSMUSG00000098866 ENSMUST00000183732 N/A N/A 43.417±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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