| Transcript ID | Breast | Muscle | Testis |
|---|---|---|---|
| ENSMUST00000111089 | 0.014±0.00 | 0.021±0.00 | 0.029±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | neurofilament, medium polypeptide | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000111089  |
Nefm-002 |
ENSMUSG00000022054 |
10090 | - |
14:68082590-68124846  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000PH | CIL_0000PH_0002 | CGP | 14:67751928-68124846 |
| CIL_0001YP | CIL_0001YP_0003 | CGP | 14:68082590-68124846 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000226 | IGI | microtubule cytoskeleton organization |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005883 | IDA | neurofilament |
| GO:0008088 | IMP | axon cargo transport |
| GO:0030424 | IDA | axon |
| GO:0031133 | IMP | regulation of axon diameter |
| GO:0031594 | IDA | neuromuscular junction |
| GO:0043005 | IDA | neuron projection |
| GO:0045104 | IMP | intermediate filament cytoskeleton organization |
| GO:0045110 | IGI | intermediate filament bundle assembly |
| GO:0060052 | IGI | neurofilament cytoskeleton organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000101424
|
nefma-201 | protein_coding | Danio_rerio | 0 | 433 |
|
ENSDART00000080256
|
nefma-001 | protein_coding | Danio_rerio | 0 | 433 |
|
ENST00000221166
|
NEFM-001 | protein_coding | Homo_sapiens | 0 | 1801 |
|
ENST00000257860
|
PRPH-001 | protein_coding | Homo_sapiens | 0.000000000001 | 81 |
|
ENST00000437366
|
NEFM-201 | protein_coding | Homo_sapiens | 0 | 1796 |
|
ENST00000518131
|
NEFM-003 | protein_coding | Homo_sapiens | 0 | 1801 |
|
ENST00000521540
|
NEFM-004 | processed_transcript | Homo_sapiens | 0 | 1796 |
|
ENST00000523467
|
NEFM-006 | processed_transcript | Homo_sapiens | 0 | 828 |
|
ENST00000530631
|
PRPH-003 | retained_intron | Homo_sapiens | 0.0000000000003 | 81 |
|
ENST00000532332
|
PRPH-004 | protein_coding | Homo_sapiens | 0.0000000000002 | 81 |
|
ENST00000610854
|
NEFL-001 | protein_coding | Homo_sapiens | 0 | 1648 |
|
ENST00000615973
|
NEFL-007 | retained_intron | Homo_sapiens | 0 | 1604 |
|
ENST00000619417
|
NEFL-201 | protein_coding | Homo_sapiens | 0 | 942 |
