C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neurofilament, medium polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022054 Nefm 10090 - 14:68082590-68124846 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022638 Nefm-001 68119283-68124846 protein_coding
  ENSMUST00000111089 Nefm-002 68082590-68124846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022638ENSMUST00000111089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022638 0.011±0.00 0.422±0.03 0.227±0.04 55.034±45.39 0.039±0.01 0.829±0.04 0.075±0.03 0.153±0.08 0.035±0.04 0.039±0.00 0.017±0.00 0.032±0.01 0.125±0.06 0.066±0.06
ENSMUST00000111089 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PH CIL_0000PH_0002 CGP 14:67751928-68124846
CIL_0001YP CIL_0001YP_0003 CGP 14:68082590-68124846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IGI microtubule cytoskeleton organization
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005883 IDA neurofilament
GO:0008088 IMP axon cargo transport
GO:0030424 IDA axon
GO:0031133 IMP regulation of axon diameter
GO:0031594 IDA neuromuscular junction
GO:0043005 IDA neuron projection
GO:0045104 IMP intermediate filament cytoskeleton organization
GO:0045110 IGI intermediate filament bundle assembly
GO:0060052 IGI neurofilament cytoskeleton organization
GO:0097418 IEA neurofibrillary tangle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021351 nefma neurofilament, medium polypeptide a protein_coding Danio_rerio
ENSDARG00000043697 nefmb neurofilament, medium polypeptide b protein_coding Danio_rerio
ENSG00000104722 NEFM neurofilament, medium polypeptide protein_coding Homo_sapiens

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