C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate 6-O-sulfotransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406696 HS6ST2-202 ENSG00000171004 9606 - X:132628223-132958602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartLiverMuscleOvaryPlacentaTestisENST00000406696
Transcript ID Bladder Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000406696 1.769±0.00 0.098±0.02 0.138±0.00 0.346±0.00 0.147±0.07 2.399±0.94 8.503±0.00 0.772±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T0 CIL_0000T0_0001 CGP X:132369317-132961395
CIL_0000SS CIL_0000SS_0001 CGP X:132626016-133097109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0008146 IEA sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114871 Hs6st2-002 protein_coding Mus_musculus 0 2429
ENSMUST00000088172 Hs6st2-001 protein_coding Mus_musculus 0 1386
ENSMUST00000142738 Hs6st2-003 retained_intron Mus_musculus 0 1061
ENSMUST00000142983 Hs6st2-005 processed_transcript Mus_musculus 0 662
ENSMUST00000065904 Hs6st3-201 protein_coding Mus_musculus 0 422
ENSMUST00000140145 Hs6st2-004 processed_transcript Mus_musculus 0 374

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