C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000XY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042469-ENSDARG00000045527 CGP 7955 4:24916974-24945771
GeneTranscriptPositionBiotype
ENSDARG00000042469 (ndufa12)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 		ENSDART00000142491 (ndufa12-001) 24916974-24923817 protein_coding
ENSDARG00000045527 (nr2c1)
nuclear receptor subfamily 2, group C, member 1 		ENSDART00000066948 (nr2c1-201) 24926699-24945771 protein_coding
ENSDART00000128968 (nr2c1-001) 24926694-24945753 protein_coding
CIL_0000XY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184752-ENSG00000120798 CGP 9606 12:94897055-95073703
GeneTranscriptPositionBiotype
ENSG00000120798 (NR2C1)
nuclear receptor subfamily 2, group C, member 1 		ENST00000330677 (NR2C1-004) 95030418-95073537 protein_coding
ENST00000333003 (NR2C1-001) 95020229-95073703 protein_coding
ENST00000393101 (NR2C1-002) 95030409-95073580 protein_coding
ENST00000545833 (NR2C1-005) 95028458-95067384 processed_transcript
ENST00000546367 (NR2C1-010) 95058353-95073510 processed_transcript
ENST00000546416 (NR2C1-014) 95022334-95049492 retained_intron
ENST00000547469 (NR2C1-009) 95067337-95073017 protein_coding
ENST00000547594 (NR2C1-013) 95026833-95057757 processed_transcript
ENST00000548252 (NR2C1-012) 95049128-95058393 processed_transcript
ENST00000548966 (NR2C1-007) 95058409-95073545 processed_transcript
ENST00000549482 (NR2C1-008) 95066928-95073503 retained_intron
ENST00000549617 (NR2C1-016) 95021921-95025349 retained_intron
ENST00000551386 (NR2C1-006) 95059920-95073615 processed_transcript
ENST00000551647 (NR2C1-018) 95021893-95040598 protein_coding
ENST00000552417 (NR2C1-011) 95058420-95067370 processed_transcript
ENST00000552484 (NR2C1-015) 95028106-95031394 retained_intron
ENST00000552791 (NR2C1-017) 95030409-95051869 nonsense_mediated_decay
ENST00000552861 (NR2C1-003) 95021893-95073569 retained_intron
ENST00000622476 (NR2C1-201) 95028458-95073628 protein_coding
ENSG00000184752 (NDUFA12)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 		ENST00000327772 (NDUFA12-001) 94971333-95003770 protein_coding
ENST00000538372 (NDUFA12-006) 94971333-94994353 retained_intron
ENST00000546788 (NDUFA12-009) 94971478-95003748 nonsense_mediated_decay
ENST00000547157 (NDUFA12-003) 94971332-95003700 protein_coding
ENST00000547447 (NDUFA12-008) 94897092-94924806 processed_transcript
ENST00000547986 (NDUFA12-002) 94971336-95003713 protein_coding
ENST00000550187 (NDUFA12-007) 94971332-94997447 processed_transcript
ENST00000551991 (NDUFA12-005) 94971333-95003608 nonsense_mediated_decay
ENST00000552205 (NDUFA12-004) 94897055-95003660 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XY_0001ENSDARG00000042469ENSDART00000142491ENSDARG00000045527ENSDART00000066948ENSDART00000128968CIL_0000XY_0002ENSG00000120798ENST00000330677ENST00000333003ENST00000393101ENST00000545833ENST00000546367ENST00000546416ENST00000547469ENST00000547594ENST00000548252ENST00000548966ENST00000549482ENST00000549617ENST00000551386ENST00000551647ENST00000552417ENST00000552484ENST00000552791ENST00000552861ENST00000622476ENSG00000184752ENST00000327772ENST00000538372ENST00000546788ENST00000547157ENST00000547447ENST00000547986ENST00000550187ENST00000551991ENST00000552205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XY_0001ENSDARG00000042469ENSDART00000142491ENSDARG00000045527ENSDART00000066948ENSDART00000128968CIL_0000XY_0002ENSG00000120798ENST00000330677ENST00000333003ENST00000393101ENST00000545833ENST00000546367ENST00000546416ENST00000548252ENST00000549617ENST00000551386ENST00000551647ENST00000552861ENST00000622476ENSG00000184752ENST00000327772ENST00000546788ENST00000547157ENST00000547986
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042469 ENSDART00000142491 N/A N/A N/A 72.174±50.74 N/A N/A 104.861±91.97 60.082±0.00 5.577±0.00 N/A 131.869±0.00 N/A N/A N/A
ENSDARG00000045527 ENSDART00000066948 N/A N/A N/A 2.197±0.66 N/A N/A 2.105±0.00 3.621±1.37 0.488±0.00 N/A N/A N/A N/A N/A
ENSDART00000128968 N/A N/A N/A 3.415±2.27 N/A N/A 4.508±1.52 2.217±0.00 N/A N/A 1.881±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120798 ENST00000330677 N/A N/A N/A N/A N/A 0.813±0.00 N/A N/A N/A N/A N/A 1.642±0.01 0.674±0.00 N/A
ENST00000333003 0.552±0.00 N/A 0.468±0.00 0.537±0.10 0.978±0.00 0.450±0.00 0.578±0.23 1.068±0.00 0.521±0.00 0.979±0.58 0.322±0.10 1.555±0.87 0.396±0.07 1.541±0.00
ENST00000393101 N/A N/A 0.590±0.00 N/A N/A N/A N/A 1.613±0.00 N/A N/A N/A 2.925±0.68 N/A 2.817±0.41
ENST00000545833 N/A N/A N/A N/A 1.255±0.00 1.440±0.00 N/A N/A N/A N/A N/A N/A 0.706±0.00 N/A
ENST00000546367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.897±0.00 5.830±0.00 17.892±0.00
ENST00000546416 N/A N/A N/A N/A 3.243±0.00 N/A N/A N/A N/A 1.712±0.00 N/A N/A N/A N/A
ENST00000547469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.772±0.00 N/A N/A N/A
ENST00000548966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549617 N/A N/A N/A N/A N/A N/A 1.510±0.00 N/A N/A N/A 3.125±0.00 6.807±1.13 1.417±0.15 7.034±0.00
ENST00000551386 N/A N/A N/A N/A N/A 3.736±0.00 N/A 7.050±0.00 N/A N/A N/A N/A N/A N/A
ENST00000551647 N/A 6.089±0.00 N/A N/A 2.766±0.00 2.158±0.00 N/A 3.671±0.00 2.615±0.00 2.081±0.00 0.970±0.00 4.545±0.00 2.450±0.00 6.806±0.23
ENST00000552417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552861 0.986±0.00 1.852±0.00 N/A 1.310±0.20 0.806±0.26 0.682±0.20 1.722±0.00 1.158±0.29 0.890±0.16 1.585±0.70 0.836±0.26 0.982±0.00 0.691±0.23 1.832±0.29
ENST00000622476 2.248±0.00 N/A 1.278±0.00 1.145±0.00 1.430±0.00 N/A 1.644±0.73 N/A N/A 1.399±0.00 1.282±0.00 N/A 1.423±0.00 2.740±0.00
ENSG00000184752 ENST00000327772 58.140±0.00 73.717±0.00 2.130±0.00 65.210±22.95 37.292±24.03 51.787±38.66 78.935±44.20 40.213±26.64 22.260±7.34 25.021±11.98 60.836±17.11 44.234±38.69 47.216±21.02 48.180±34.18
ENST00000538372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.252±0.00 30.380±0.00 17.555±0.00
ENST00000547157 N/A N/A 2.329±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547986 N/A N/A N/A N/A N/A 4.926±0.00 N/A N/A N/A N/A N/A 3.741±1.56 N/A N/A
ENST00000550187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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