C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ZI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078041-ENSDARG00000089742 CGP 7955 1:54220653-54255339
GeneTranscriptPositionBiotype
ENSDARG00000078041 (xpo1a)
exportin 1 (CRM1 homolog, yeast) a 		ENSDART00000108906 (xpo1a-201) 54220653-54244553 protein_coding
ENSDARG00000089742 (FAM161A)
family with sequence similarity 161, member A 		ENSDART00000127216 (FAM161A-201) 54247909-54255339 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000ZI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000082898-ENSG00000170264 CGP 9606 2:61477849-61854143
GeneTranscriptPositionBiotype
ENSG00000082898 (XPO1)
exportin 1 		ENST00000401558 (XPO1-001) 61477849-61538283 protein_coding
ENST00000404992 (XPO1-006) 61478338-61537110 protein_coding
ENST00000406957 (XPO1-004) 61478700-61538248 protein_coding
ENST00000420673 (XPO1-019) 61522611-61534278 protein_coding
ENST00000422552 (XPO1-018) 61522626-61534512 protein_coding
ENST00000428210 (XPO1-005) 61477934-61538231 nonsense_mediated_decay
ENST00000436018 (XPO1-009) 61526471-61538626 protein_coding
ENST00000437159 (XPO1-024) 61496994-61526518 nonsense_mediated_decay
ENST00000443240 (XPO1-008) 61502006-61538626 protein_coding
ENST00000449444 (XPO1-016) 61526462-61536588 protein_coding
ENST00000451765 (XPO1-015) 61499765-61537117 protein_coding
ENST00000457483 (XPO1-017) 61522630-61537640 protein_coding
ENST00000460037 (XPO1-027) 61493638-61495573 retained_intron
ENST00000461407 (XPO1-007) 61482625-61488663 retained_intron
ENST00000468259 (XPO1-022) 61502290-61525775 processed_transcript
ENST00000469337 (XPO1-028) 61492342-61492994 retained_intron
ENST00000475744 (XPO1-026) 61496961-61498874 retained_intron
ENST00000476585 (XPO1-023) 61502146-61526523 processed_transcript
ENST00000481073 (XPO1-014) 61477935-61494743 retained_intron
ENST00000481214 (XPO1-020) 61526067-61537694 processed_transcript
ENST00000489954 (XPO1-025) 61499717-61502608 retained_intron
ENST00000492182 (XPO1-030) 61482625-61485958 retained_intron
ENST00000494468 (XPO1-029) 61485584-61488663 processed_transcript
ENST00000495003 (XPO1-021) 61526151-61533968 processed_transcript
ENSG00000170264 (FAM161A)
family with sequence similarity 161, member A 		ENST00000307507 (FAM161A-003) 61836057-61854064 nonsense_mediated_decay
ENST00000404929 (FAM161A-005) 61824856-61854053 protein_coding
ENST00000405894 (FAM161A-001) 61824856-61854143 protein_coding
ENST00000418113 (FAM161A-004) 61824856-61854028 nonsense_mediated_decay
ENST00000456262 (FAM161A-002) 61824854-61854092 nonsense_mediated_decay
ENST00000478494 (FAM161A-009) 61827104-61836484 retained_intron
ENST00000496369 (FAM161A-008) 61835515-61839524 retained_intron
ENSG00000213486 (AC108039.1)
 ENST00000456719 (AC108039.1-001) 61710076-61710978 processed_pseudogene
ENSG00000227361 (RPS24P7)
ribosomal protein S24 pseudogene 7 		ENST00000416921 (RPS24P7-001) 61803143-61803388 processed_pseudogene
ENSG00000229831 (AC108039.3)
 ENST00000440214 (AC108039.3-001) 61820208-61820566 processed_pseudogene
ENSG00000271243 (RP11-355B11.1)
 ENST00000603988 (RP11-355B11.1-001) 61575774-61576394 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZI_0001ENSDARG00000078041ENSDART00000108906ENSDARG00000089742ENSDART00000127216CIL_0000ZI_0002ENSG00000082898ENST00000401558ENST00000404992ENST00000406957ENST00000420673ENST00000422552ENST00000428210ENST00000436018ENST00000437159ENST00000443240ENST00000449444ENST00000451765ENST00000457483ENST00000460037ENST00000461407ENST00000468259ENST00000469337ENST00000475744ENST00000476585ENST00000481073ENST00000481214ENST00000489954ENST00000492182ENST00000494468ENST00000495003ENSG00000170264ENST00000307507ENST00000404929ENST00000405894ENST00000418113ENST00000456262ENST00000478494ENST00000496369ENSG00000213486ENST00000456719ENSG00000227361ENST00000416921ENSG00000229831ENST00000440214ENSG00000271243ENST00000603988
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZI_0001ENSDARG00000078041ENSDART00000108906ENSDARG00000089742ENSDART00000127216CIL_0000ZI_0002ENSG00000082898ENST00000401558ENST00000404992ENST00000406957ENST00000428210ENST00000481073ENSG00000170264ENST00000307507ENST00000404929ENST00000405894ENST00000418113ENST00000456262ENST00000478494ENST00000496369ENSG00000213486ENST00000456719ENSG00000227361ENST00000416921ENSG00000229831ENST00000440214ENSG00000271243ENST00000603988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078041 ENSDART00000108906 N/A N/A N/A 0.209±0.04 N/A N/A 2.833±2.75 N/A 3.178±0.00 N/A N/A N/A N/A N/A
ENSDARG00000089742 ENSDART00000127216 N/A N/A N/A 0.501±0.06 N/A N/A 0.216±0.06 0.230±0.00 0.019±0.00 N/A 0.094±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082898 ENST00000401558 9.380±0.00 8.927±0.00 1.037±0.00 7.984±4.15 5.434±2.51 3.896±0.50 4.000±1.33 6.336±0.00 3.403±0.04 3.291±0.54 3.512±1.74 15.460±6.76 8.441±2.33 9.585±0.23
ENST00000404992 N/A N/A 1.474±0.00 5.012±0.00 N/A 6.140±0.00 1.654±0.12 N/A 4.673±0.00 6.756±0.00 N/A 4.326±0.00 N/A N/A
ENST00000406957 N/A N/A N/A N/A 6.667±0.00 3.402±0.00 N/A N/A N/A N/A 1.464±0.00 9.984±0.00 N/A N/A
ENST00000420673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428210 N/A N/A 0.916±0.00 1.177±0.00 1.652±0.00 N/A N/A 0.929±0.00 N/A 1.682±0.00 0.581±0.00 3.002±0.00 N/A N/A
ENST00000436018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481073 N/A 5.674±0.00 1.803±0.00 N/A N/A N/A N/A N/A 4.260±0.00 4.292±0.00 N/A 20.241±9.82 13.668±0.00 23.052±0.00
ENST00000481214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170264 ENST00000307507 N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A 0.107±0.00 N/A N/A N/A 0.105±0.00 N/A
ENST00000404929 N/A N/A N/A N/A N/A 0.586±0.00 0.093±0.00 N/A 0.269±0.00 0.121±0.00 N/A 0.528±0.24 0.130±0.04 1.287±0.61
ENST00000405894 N/A N/A 0.125±0.00 0.723±0.52 N/A N/A N/A N/A N/A 0.211±0.11 0.631±0.00 0.737±0.39 0.119±0.02 1.375±0.23
ENST00000418113 0.349±0.00 N/A 0.126±0.00 0.510±0.00 0.123±0.03 N/A N/A N/A 0.046±0.00 0.476±0.00 N/A 0.383±0.00 0.096±0.00 N/A
ENST00000456262 N/A N/A N/A N/A 0.187±0.00 N/A 0.218±0.00 N/A 0.026±0.00 N/A N/A 0.468±0.00 0.089±0.00 0.716±0.00
ENST00000478494 N/A N/A N/A N/A 0.319±0.00 N/A N/A N/A N/A N/A N/A 1.009±0.00 0.390±0.00 N/A
ENST00000496369 N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 N/A N/A 1.194±0.00 0.951±0.00 18.989±0.00
ENSG00000213486 ENST00000456719 N/A N/A N/A N/A N/A 0.022±0.00 N/A 0.140±0.00 N/A 0.023±0.00 N/A N/A N/A 0.095±0.00
ENSG00000227361 ENST00000416921 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A 0.042±0.00 0.891±0.00 N/A 0.130±0.00
ENSG00000229831 ENST00000440214 N/A 0.052±0.00 N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A 0.094±0.00
ENSG00000271243 ENST00000603988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00

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