C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428210 XPO1-005 ENSG00000082898 9606 - 2:61477934-61538231 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLungMuscleOvaryENST00000428210
Transcript ID Bladder Brain Breast Kidney Lung Muscle Ovary
ENST00000428210 0.916±0.00 1.177±0.00 1.652±0.00 0.929±0.00 1.682±0.00 0.581±0.00 3.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N6 CIL_0007N6_0001 UCNEbase 2:61187520-61525646
CIL_0000ZI CIL_0000ZI_0002 CGP 2:61477849-61854143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109551 Xpo1-202 protein_coding Mus_musculus 0 3609
ENSMUST00000020538 Xpo1-201 protein_coding Mus_musculus 0 3609
ENSMUST00000102869 Xpo1-001 protein_coding Mus_musculus 0 3609
ENSMUST00000149371 Xpo1-003 processed_transcript Mus_musculus 0 3179
ENSMUST00000102870 Xpo1-002 protein_coding Mus_musculus 0 2691
ENSMUST00000150750 Xpo1-004 protein_coding Mus_musculus 0 569
ENSMUST00000136235 Xpo1-005 protein_coding Mus_musculus 0 324
ENSDART00000154823 xpo1b-001 protein_coding Danio_rerio 0 195

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