C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000ZM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136213-ENSG00000275572 CGP 9606 7:2403560-2476894
GeneTranscriptPositionBiotype
ENSG00000136213 (CHST12)
carbohydrate (chondroitin 4) sulfotransferase 12
ENST00000258711 (CHST12-002) 2403588-2434607 protein_coding
ENST00000432336 (CHST12-003) 2404099-2433375 protein_coding
ENST00000618655 (CHST12-201) 2403560-2434579 protein_coding
ENSG00000175873 (AC004840.9)
ENST00000313156 (AC004840.9-001) 2437763-2447850 lincRNA
ENSG00000275572 (GRIFIN)
galectin-related inter-fiber protein
ENST00000611693 (GRIFIN-002) 2475430-2476894 retained_intron
ENST00000614228 (GRIFIN-001) 2474844-2476383 protein_coding
CIL_0000ZM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036599-ENSMUSG00000036586 CGP 10090 5:140505550-140565071
GeneTranscriptPositionBiotype
ENSMUSG00000036586 (Grifin)
galectin-related inter-fiber protein
ENSMUST00000042993 (Grifin-001) 140563119-140565071 protein_coding
ENSMUSG00000036599 (Chst12)
carbohydrate sulfotransferase 12
ENSMUST00000043050 (Chst12-001) 140505550-140525724 protein_coding
ENSMUST00000124142 (Chst12-002) 140505575-140524153 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZM_0001ENSG00000136213ENST00000258711ENST00000432336ENST00000618655ENSG00000175873ENST00000313156ENSG00000275572ENST00000611693ENST00000614228CIL_0000ZM_0002ENSMUSG00000036586ENSMUST00000042993ENSMUSG00000036599ENSMUST00000043050ENSMUST00000124142
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZM_0001ENSG00000136213ENST00000258711ENST00000432336ENST00000618655ENSG00000175873ENST00000313156ENSG00000275572ENST00000611693ENST00000614228CIL_0000ZM_0002ENSMUSG00000036586ENSMUST00000042993ENSMUSG00000036599ENSMUST00000043050ENSMUST00000124142
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136213 ENST00000258711 1.148±0.00 8.104±0.00 0.576±0.00 0.604±0.44 1.657±1.35 0.714±0.01 1.041±0.77 0.930±0.00 N/A 1.749±1.34 N/A 1.442±0.00 3.438±0.80 3.344±0.00
ENST00000432336 10.403±0.00 15.308±0.00 N/A 2.574±2.05 8.023±7.41 7.585±0.00 1.021±0.81 N/A 0.374±0.00 0.660±0.00 2.690±0.00 9.004±0.00 N/A 10.461±0.00
ENST00000618655 1.687±0.00 N/A N/A N/A 0.912±0.00 1.306±0.00 1.163±0.00 3.859±0.00 1.755±0.00 4.049±0.00 0.889±0.00 5.032±2.35 6.320±4.04 N/A
ENSG00000175873 ENST00000313156 0.635±0.00 0.612±0.00 0.382±0.00 N/A 0.444±0.39 0.318±0.06 0.368±0.30 1.178±0.00 0.309±0.17 0.609±0.39 0.478±0.00 0.366±0.24 0.910±0.10 0.716±0.00
ENSG00000275572 ENST00000611693 N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A 0.121±0.00 N/A N/A
ENST00000614228 N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036586 ENSMUST00000042993 0.093±0.04 N/A N/A 0.107±0.01 0.113±0.02 N/A N/A 0.060±0.00 1.944±1.30 N/A N/A 0.260±0.14 0.164±0.00 N/A
ENSMUSG00000036599 ENSMUST00000043050 19.771±4.95 6.935±0.50 15.816±7.27 3.244±0.96 17.671±7.66 10.758±1.44 1.819±0.54 1.715±0.48 1.709±1.34 19.637±1.12 1.165±0.67 10.282±4.43 4.192±2.48 0.798±0.40
ENSMUST00000124142 N/A N/A N/A 3.544±0.00 8.525±0.00 N/A N/A N/A 0.158±0.00 N/A N/A 3.171±0.69 3.234±2.21 0.146±0.00

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