C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (chondroitin 4) sulfotransferase 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136213 CHST12 9606 + 7:2403560-2434607 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258711 CHST12-002 2403588-2434607 protein_coding
  ENST00000432336 CHST12-003 2404099-2433375 protein_coding
  ENST00000618655 CHST12-201 2403560-2434579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258711ENST00000432336ENST00000618655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258711 1.148±0.00 8.104±0.00 0.576±0.00 0.604±0.44 1.657±1.35 0.714±0.01 1.041±0.77 0.930±0.00 N/A 1.749±1.34 N/A 1.442±0.00 3.438±0.80 3.344±0.00
ENST00000432336 10.403±0.00 15.308±0.00 N/A 2.574±2.05 8.023±7.41 7.585±0.00 1.021±0.81 N/A 0.374±0.00 0.660±0.00 2.690±0.00 9.004±0.00 N/A 10.461±0.00
ENST00000618655 1.687±0.00 N/A N/A N/A 0.912±0.00 1.306±0.00 1.163±0.00 3.859±0.00 1.755±0.00 4.049±0.00 0.889±0.00 5.032±2.35 6.320±4.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RS CIL_0007RS_0001 VISTA 7:2311652-2915186
CIL_00027M CIL_00027M_0002 CGP 7:2354086-2434607
CIL_0000ZM CIL_0000ZM_0001 CGP 7:2403560-2476894

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0008146 IEA sulfotransferase activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030173 NAS integral component of Golgi membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0030208 IDA dermatan sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0047756 IDA chondroitin 4-sulfotransferase activity
GO:0050656 NAS 3'-phosphoadenosine 5'-phosphosulfate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028786 chst12a carbohydrate (chondroitin 4) sulfotransferase 12a protein_coding Danio_rerio
ENSDARG00000077198 chst12b carbohydrate (chondroitin 4) sulfotransferase 12b protein_coding Danio_rerio
ENSDARG00000092200 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000092242 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000093636 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000094981 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000095482 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSMUSG00000036599 Chst12 carbohydrate sulfotransferase 12 protein_coding Mus_musculus

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