C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate sulfotransferase 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036599 Chst12 10090 + 5:140505550-140525724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043050 Chst12-001 140505550-140525724 protein_coding
  ENSMUST00000124142 Chst12-002 140505575-140524153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043050ENSMUST00000124142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043050 19.771±4.95 6.935±0.50 15.816±7.27 3.244±0.96 17.671±7.66 10.758±1.44 1.819±0.54 1.715±0.48 1.709±1.34 19.637±1.12 1.165±0.67 10.282±4.43 4.192±2.48 0.798±0.40
ENSMUST00000124142 N/A N/A N/A 3.544±0.00 8.525±0.00 N/A N/A N/A 0.158±0.00 N/A N/A 3.171±0.69 3.234±2.21 0.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RS CIL_0007RS_0002 VISTA 5:140361312-140964153
CIL_00027M CIL_00027M_0003 CGP 5:140419305-140525724
CIL_0000ZM CIL_0000ZM_0002 CGP 5:140505550-140565071

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030206 ISS chondroitin sulfate biosynthetic process
GO:0030208 ISS dermatan sulfate biosynthetic process
GO:0047756 ISS chondroitin 4-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028786 chst12a carbohydrate (chondroitin 4) sulfotransferase 12a protein_coding Danio_rerio
ENSDARG00000077198 chst12b carbohydrate (chondroitin 4) sulfotransferase 12b protein_coding Danio_rerio
ENSDARG00000092200 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000092242 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000093636 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000094981 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSDARG00000095482 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Danio_rerio
ENSG00000136213 CHST12 carbohydrate (chondroitin 4) sulfotransferase 12 protein_coding Homo_sapiens

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