C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUB1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564581 SUB1P3-001 ENSG00000261612 9606 - 16:4562814-4563128 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainTestisENST00000564581
Transcript ID Adipose Adrenal Brain Testis
ENST00000564581 0.039±0.00 0.125±0.00 0.081±0.00 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000108 CIL_000108_0001 CGP 16:4510675-4600714
CIL_00010C CIL_00010C_0001 CGP 16:4556490-4615027

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110504 Sub1-002 protein_coding Mus_musculus 0 276
ENSMUST00000022816 Sub1-001 protein_coding Mus_musculus 0 276
ENSMUST00000134414 Sub1-003 processed_transcript Mus_musculus 0 209
ENSMUST00000129533 Sub1-004 retained_intron Mus_musculus 0 209

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