C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00011A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183479-ENSG00000213397 CGP 9606 X:153444720-153495516
GeneTranscriptPositionBiotype
ENSG00000182492 (BGN)
biglycan
ENST00000331595 (BGN-001) 153494939-153509554 protein_coding
ENST00000431891 (BGN-002) 153494993-153506626 protein_coding
ENST00000472615 (BGN-004) 153494981-153509546 processed_transcript
ENST00000480756 (BGN-005) 153494983-153509546 processed_transcript
ENST00000492658 (BGN-006) 153505869-153508805 processed_transcript
ENSG00000183479 (TREX2)
three prime repair exonuclease 2
ENST00000330912 (TREX2-003) 153444720-153470587 protein_coding
ENST00000334497 (TREX2-001) 153444720-153470587 protein_coding
ENST00000338525 (TREX2-004) 153444720-153470587 protein_coding
ENST00000370212 (TREX2-201) 153444720-153470587 protein_coding
ENST00000370231 (TREX2-202) 153444720-153446487 protein_coding
ENST00000370232 (TREX2-002) 153444720-153470587 protein_coding
ENST00000393862 (TREX2-005) 153444720-153447863 protein_coding
ENSG00000224963 (U82695.9)
ENST00000428676 (U82695.9-001) 153485856-153487088 antisense
CIL_00011A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031372-ENSMUSG00000031371 CGP 10090 X:73433705-73459044
GeneTranscriptPositionBiotype
ENSMUSG00000031371 (Haus7)
HAUS augmin-like complex, subunit 7
ENSMUST00000033737 (Haus7-001) 73437315-73459044 protein_coding
ENSMUST00000077243 (Haus7-002) 73437315-73459044 protein_coding
ENSMUST00000131140 (Haus7-003) 73437317-73447279 processed_transcript
ENSMUSG00000031372 (Trex2)
three prime repair exonuclease 2
ENSMUST00000033738 (Trex2-001) 73433705-73435344 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011A_0001ENSG00000182492ENST00000331595ENST00000431891ENST00000472615ENST00000480756ENST00000492658ENSG00000183479ENST00000330912ENST00000334497ENST00000338525ENST00000370212ENST00000370231ENST00000370232ENST00000393862ENSG00000224963ENST00000428676CIL_00011A_0002ENSMUSG00000031371ENSMUST00000033737ENSMUST00000077243ENSMUST00000131140ENSMUSG00000031372ENSMUST00000033738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011A_0001ENSG00000182492ENST00000331595ENST00000472615ENST00000480756ENST00000492658ENSG00000183479ENST00000330912ENST00000338525ENSG00000224963ENST00000428676CIL_00011A_0002ENSMUSG00000031371ENSMUST00000033737ENSMUST00000077243ENSMUST00000131140ENSMUSG00000031372ENSMUST00000033738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182492 ENST00000331595 21.082±0.00 N/A 7.259±0.00 3.520±2.17 12.895±0.00 0.940±0.00 28.542±27.00 44.065±33.97 13.287±8.82 94.783±89.51 11.238±10.36 94.906±58.88 388.803±95.96 42.873±1.24
ENST00000431891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472615 16.064±0.00 95.964±0.00 N/A 16.847±0.00 41.981±0.00 19.326±0.00 N/A N/A 13.892±0.00 53.976±0.00 N/A N/A N/A 97.599±0.00
ENST00000480756 37.722±0.00 167.702±0.00 N/A 32.161±0.00 60.463±0.00 37.038±0.00 14.365±0.00 103.024±0.00 41.041±0.00 91.105±0.00 N/A 24.196±0.00 N/A 173.819±0.00
ENST00000492658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.860±0.00
ENSG00000183479 ENST00000330912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.715±0.00 N/A
ENST00000334497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000338525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.485±0.00 N/A N/A
ENST00000370212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224963 ENST00000428676 0.037±0.00 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 0.291±0.03 0.130±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031371 ENSMUST00000033737 7.454±0.43 8.874±1.39 8.348±2.16 7.847±5.25 8.647±0.53 3.908±0.53 1.448±0.33 4.553±0.60 12.568±7.76 4.923±0.86 2.359±0.27 15.019±2.58 11.989±5.78 13.045±1.22
ENSMUST00000077243 2.181±0.18 2.228±0.09 1.230±0.00 0.547±0.00 4.297±1.19 1.203±0.17 1.358±0.30 1.150±0.14 1.625±0.31 1.380±0.00 2.769±0.59 N/A 3.029±1.76 3.871±0.00
ENSMUST00000131140 N/A N/A N/A 2.499±0.00 N/A N/A N/A N/A N/A N/A N/A 10.822±1.36 3.693±0.00 7.205±0.00
ENSMUSG00000031372 ENSMUST00000033738 0.065±0.03 0.050±0.02 1.513±0.13 0.056±0.03 0.741±0.41 0.098±0.04 0.030±0.00 0.044±0.02 0.021±0.01 15.925±15.45 N/A 0.319±0.19 0.067±0.01 0.033±0.01

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