C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: biglycan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472615 BGN-004 ENSG00000182492 9606 + X:153494981-153509546 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungTestisENST00000472615
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Testis
ENST00000472615 16.064±0.00 95.964±0.00 16.847±0.00 41.981±0.00 19.326±0.00 13.892±0.00 53.976±0.00 97.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011A CIL_00011A_0001 CGP X:153444720-153495516
CIL_0001V1 CIL_0001V1_0001 CGP X:153447666-153509554
CIL_0001V0 CIL_0001V0_0001 CGP X:153494939-153582939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169489 Bgn-201 protein_coding Mus_musculus 0 896
ENSMUST00000033741 Bgn-001 protein_coding Mus_musculus 0 896
ENSMUST00000155231 Bgn-006 processed_transcript Mus_musculus 0 313
ENSMUST00000133394 Bgn-005 processed_transcript Mus_musculus 0 230
ENSMUST00000140803 Bgn-002 retained_intron Mus_musculus 0 198
ENSMUST00000141945 Bgn-003 retained_intron Mus_musculus 0 198

Loading