C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00012R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021569-ENSDARG00000011079 CGP 7955 9:21839679-21905910
GeneTranscriptPositionBiotype
ENSDARG00000011079 (wdr3)
WD repeat domain 3
ENSDART00000003648 (wdr3-001) 21887239-21905910 protein_coding
ENSDART00000131713 (wdr3-002) 21891065-21892838 processed_transcript
ENSDART00000142280 (wdr3-004) 21900614-21904402 retained_intron
ENSDART00000145259 (wdr3-003) 21897013-21902539 retained_intron
ENSDART00000147892 (wdr3-005) 21902511-21905910 protein_coding
ENSDARG00000021569 (gdap2)
ganglioside induced differentiation associated protein 2
ENSDART00000028247 (gdap2-201) 21839679-21886784 protein_coding
ENSDART00000124301 (gdap2-202) 21856303-21886784 protein_coding
ENSDART00000133321 (gdap2-001) 21857623-21886812 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00012R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196505-ENSG00000065183 CGP 9606 1:117863485-117966542
GeneTranscriptPositionBiotype
ENSG00000065183 (WDR3)
WD repeat domain 3
ENST00000349139 (WDR3-001) 117929768-117966542 protein_coding
ENST00000369441 (WDR3-201) 117929720-117941788 protein_coding
ENST00000471680 (WDR3-003) 117929775-117938529 processed_transcript
ENST00000487202 (WDR3-002) 117929724-117938558 processed_transcript
ENSG00000155761 (SPAG17)
sperm associated antigen 17
ENST00000336338 (SPAG17-001) 117953864-118185223 protein_coding
ENST00000437255 (SPAG17-002) 117965097-118008070 protein_coding
ENST00000463628 (SPAG17-004) 118085978-118087162 processed_transcript
ENST00000465053 (SPAG17-003) 118150397-118185223 processed_transcript
ENST00000466857 (SPAG17-012) 117953861-117964810 processed_transcript
ENST00000469128 (SPAG17-011) 117953873-117970118 processed_transcript
ENST00000470550 (SPAG17-008) 118025264-118040767 processed_transcript
ENST00000473472 (SPAG17-006) 118073941-118081296 processed_transcript
ENST00000477444 (SPAG17-005) 118054054-118081486 processed_transcript
ENST00000478697 (SPAG17-013) 117953864-117966752 processed_transcript
ENST00000483383 (SPAG17-009) 117973482-117987992 processed_transcript
ENST00000486589 (SPAG17-007) 118031746-118039342 processed_transcript
ENST00000492438 (SPAG17-010) 117971780-117984748 processed_transcript
ENSG00000196505 (GDAP2)
ganglioside induced differentiation associated protein 2
ENST00000369442 (GDAP2-002) 117877222-117929583 protein_coding
ENST00000369443 (GDAP2-001) 117863485-117929630 protein_coding
ENST00000464026 (GDAP2-006) 117882904-117899130 processed_transcript
ENST00000491626 (GDAP2-005) 117870184-117887733 processed_transcript
ENST00000493555 (GDAP2-004) 117896616-117920207 processed_transcript
ENST00000494224 (GDAP2-003) 117912530-117929560 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012R_0001ENSDARG00000011079ENSDART00000003648ENSDART00000131713ENSDART00000142280ENSDART00000145259ENSDART00000147892ENSDARG00000021569ENSDART00000028247ENSDART00000124301ENSDART00000133321CIL_00012R_0002ENSG00000065183ENST00000349139ENST00000369441ENST00000471680ENST00000487202ENSG00000155761ENST00000336338ENST00000437255ENST00000463628ENST00000465053ENST00000466857ENST00000469128ENST00000470550ENST00000473472ENST00000477444ENST00000478697ENST00000483383ENST00000486589ENST00000492438ENSG00000196505ENST00000369442ENST00000369443ENST00000464026ENST00000491626ENST00000493555ENST00000494224
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012R_0001ENSDARG00000011079ENSDART00000003648ENSDART00000142280ENSDART00000145259ENSDARG00000021569ENSDART00000028247ENSDART00000133321CIL_00012R_0002ENSG00000065183ENST00000349139ENST00000369441ENSG00000155761ENST00000336338ENST00000470550ENSG00000196505ENST00000369442ENST00000369443ENST00000491626ENST00000493555
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011079 ENSDART00000003648 N/A N/A N/A 3.624±1.24 N/A N/A 6.366±4.60 7.744±10.26 9.664±0.00 N/A 4.890±0.00 N/A N/A N/A
ENSDART00000131713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142280 N/A N/A N/A N/A N/A N/A N/A 2.199±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000145259 N/A N/A N/A N/A N/A N/A 6.546±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000021569 ENSDART00000028247 N/A N/A N/A 4.870±0.70 N/A N/A 6.080±2.21 8.850±1.70 1.436±0.00 N/A 1.932±0.00 N/A N/A N/A
ENSDART00000124301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133321 N/A N/A N/A 2.942±0.00 N/A N/A 3.915±0.00 3.761±0.00 0.474±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065183 ENST00000349139 1.744±0.00 0.493±0.00 N/A 1.290±0.29 1.265±0.43 0.644±0.00 0.499±0.30 2.178±0.00 0.230±0.00 1.267±0.57 0.896±0.35 1.647±0.57 1.885±0.61 3.859±0.32
ENST00000369441 N/A N/A N/A 3.094±0.00 N/A N/A N/A N/A N/A 3.727±0.00 1.694±0.00 N/A 2.098±0.00 N/A
ENST00000471680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155761 ENST00000336338 N/A N/A N/A N/A 0.662±0.00 N/A N/A N/A N/A 0.756±0.07 N/A 1.417±0.00 N/A 9.458±4.24
ENST00000437255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.502±0.00
ENST00000473472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196505 ENST00000369442 N/A N/A N/A 1.351±0.98 2.538±0.00 2.182±0.00 0.460±0.00 N/A 0.336±0.00 3.585±0.00 N/A 1.023±0.00 0.661±0.12 1.968±0.00
ENST00000369443 1.374±0.00 0.209±0.00 3.625±0.00 0.820±0.74 1.556±0.70 3.589±0.00 0.583±0.00 1.589±1.13 6.716±0.00 4.644±0.00 0.581±0.34 1.362±1.29 0.488±0.12 0.871±0.24
ENST00000464026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491626 N/A N/A N/A N/A N/A 1.860±0.00 N/A 2.901±0.00 N/A N/A 0.659±0.00 2.239±0.00 2.211±0.61 5.761±1.14
ENST00000493555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.826±0.00 1.808±0.95 5.891±1.62
ENST00000494224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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