C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ganglioside induced differentiation associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369442 GDAP2-002 ENSG00000196505 9606 - 1:117877222-117929583 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000369442
Transcript ID Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000369442 1.351±0.98 2.538±0.00 2.182±0.00 0.460±0.00 0.336±0.00 3.585±0.00 1.023±0.00 0.661±0.12 1.968±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A1 CIL_0008A1_0001 VISTA 1:117312950-117913675
CIL_0008HM CIL_0008HM_0001 VISTA 1:117358424-117964281
CIL_00012Q CIL_00012Q_0002 CGP 1:117605934-117929630
CIL_00012R CIL_00012R_0002 CGP 1:117863485-117966542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005765 IDA lysosomal membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106997 Gdap2-002 protein_coding Mus_musculus 0 1807
ENSMUST00000029459 Gdap2-001 protein_coding Mus_musculus 0 1799

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