C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00018X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115008-ENSG00000125538 CGP 9606 2:112773915-112836903
GeneTranscriptPositionBiotype
ENSG00000115008 (IL1A)
interleukin 1, alpha
ENST00000263339 (IL1A-001) 112773915-112784590 protein_coding
ENSG00000125538 (IL1B)
interleukin 1, beta
ENST00000263341 (IL1B-001) 112829751-112836903 protein_coding
ENST00000416750 (IL1B-006) 112832795-112836702 protein_coding
ENST00000418817 (IL1B-003) 112832699-112836816 protein_coding
ENST00000432018 (IL1B-007) 112832752-112836434 protein_coding
ENST00000477398 (IL1B-004) 112835181-112836779 retained_intron
ENST00000487639 (IL1B-008) 112831136-112833575 retained_intron
ENST00000491056 (IL1B-002) 112830361-112836779 processed_transcript
ENST00000496280 (IL1B-005) 112832913-112836779 retained_intron
CIL_00018X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027399-ENSMUSG00000027398 CGP 10090 2:129299610-129371139
GeneTranscriptPositionBiotype
ENSMUSG00000027398 (Il1b)
interleukin 1 beta
ENSMUST00000028881 (Il1b-001) 129364570-129371139 protein_coding
ENSMUST00000141979 (Il1b-002) 129365122-129367351 processed_transcript
ENSMUST00000155994 (Il1b-003) 129369729-129371139 retained_intron
ENSMUSG00000027399 (Il1a)
interleukin 1 alpha
ENSMUST00000028882 (Il1a-001) 129299610-129309972 protein_coding
ENSMUSG00000065057 (Gm25703)
predicted gene, 25703
ENSMUST00000083123 (Gm25703-201) 129315329-129315479 snRNA
ENSMUSG00000074805 (Il1bos)
interleukin 1 beta, opposite strand
ENSMUST00000143500 (Il1bos-002) 129369902-129375733 antisense
ENSMUST00000156601 (Il1bos-001) 129369897-129375748 antisense
ENSMUST00000168775 (Il1bos-201) 129373129-129375077 antisense
ENSMUSG00000085498 (Gm14023)
predicted gene 14023
ENSMUST00000144178 (Gm14023-001) 129297370-129307826 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018X_0001ENSG00000115008ENST00000263339ENSG00000125538ENST00000263341ENST00000416750ENST00000418817ENST00000432018ENST00000477398ENST00000487639ENST00000491056ENST00000496280CIL_00018X_0002ENSMUSG00000027398ENSMUST00000028881ENSMUST00000141979ENSMUST00000155994ENSMUSG00000027399ENSMUST00000028882ENSMUSG00000065057ENSMUST00000083123ENSMUSG00000074805ENSMUST00000143500ENSMUST00000156601ENSMUST00000168775ENSMUSG00000085498ENSMUST00000144178
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018X_0001ENSG00000115008ENST00000263339ENSG00000125538ENST00000263341ENST00000416750ENST00000418817ENST00000432018ENST00000477398ENST00000487639ENST00000491056CIL_00018X_0002ENSMUSG00000027398ENSMUST00000028881ENSMUST00000141979ENSMUST00000155994ENSMUSG00000027399ENSMUST00000028882ENSMUSG00000065057ENSMUST00000083123ENSMUSG00000074805ENSMUST00000143500ENSMUST00000156601ENSMUST00000168775ENSMUSG00000085498ENSMUST00000144178
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115008 ENST00000263339 0.029±0.00 N/A N/A 0.098±0.00 0.026±0.02 N/A 0.004±0.00 0.037±0.00 0.023±0.00 0.668±0.12 N/A 2.208±2.51 0.385±0.20 3.632±1.63
ENSG00000125538 ENST00000263341 0.050±0.00 3.610±0.00 0.169±0.00 1.251±0.54 0.989±0.00 0.255±0.07 0.510±0.00 0.627±0.46 0.290±0.24 6.367±1.59 0.267±0.00 2.215±0.55 6.978±3.11 0.340±0.00
ENST00000416750 N/A N/A N/A N/A N/A N/A N/A 1.269±0.00 N/A N/A N/A N/A N/A 0.478±0.00
ENST00000418817 N/A N/A N/A N/A N/A N/A 0.550±0.00 0.659±0.00 N/A N/A N/A N/A N/A N/A
ENST00000432018 N/A N/A N/A 0.507±0.00 N/A N/A N/A N/A 1.419±0.00 N/A N/A N/A N/A 0.273±0.00
ENST00000477398 N/A N/A N/A N/A N/A N/A N/A N/A 0.445±0.00 N/A N/A N/A N/A N/A
ENST00000487639 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.179±0.00 N/A 0.266±0.00
ENST00000491056 N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A 0.148±0.00 2.119±0.00 N/A N/A N/A N/A
ENST00000496280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027398 ENSMUST00000028881 0.167±0.13 0.181±0.06 0.089±0.02 0.024±0.02 0.411±0.17 0.247±0.12 0.311±0.09 0.338±0.13 0.332±0.23 2.440±1.27 0.115±0.08 0.428±0.61 0.412±0.30 0.374±0.00
ENSMUST00000141979 N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.10 N/A N/A N/A N/A N/A
ENSMUST00000155994 0.167±0.12 0.132±0.00 N/A 0.013±0.00 0.109±0.00 N/A 0.150±0.00 N/A 0.126±0.02 N/A 0.063±0.00 0.303±0.06 N/A 0.538±0.00
ENSMUSG00000027399 ENSMUST00000028882 0.080±0.03 0.135±0.09 N/A 0.168±0.01 0.194±0.05 0.099±0.06 0.055±0.00 0.094±0.01 2.347±1.72 1.605±0.27 0.075±0.02 0.248±0.12 0.939±0.22 0.500±0.11
ENSMUSG00000065057 ENSMUST00000083123 N/A N/A N/A N/A N/A N/A N/A N/A 5.024±0.00 N/A N/A N/A 1.006±0.00 N/A
ENSMUSG00000074805 ENSMUST00000143500 N/A N/A 0.104±0.02 0.025±0.02 N/A N/A N/A 0.136±0.00 0.062±0.00 N/A N/A 0.145±0.04 0.285±0.16 0.480±0.00
ENSMUST00000156601 N/A N/A 0.035±0.00 N/A 0.139±0.00 N/A N/A 0.051±0.00 0.025±0.00 N/A N/A 0.037±0.00 0.082±0.07 0.397±0.14
ENSMUST00000168775 0.090±0.04 0.169±0.00 0.066±0.00 0.023±0.00 0.058±0.01 0.066±0.00 N/A 0.040±0.00 0.042±0.01 N/A 0.011±0.00 0.213±0.10 N/A N/A
ENSMUSG00000085498 ENSMUST00000144178 0.325±0.09 0.253±0.12 0.606±0.00 0.123±0.06 0.262±0.10 0.202±0.12 0.228±0.08 0.360±0.16 0.660±0.19 0.453±0.00 0.280±0.15 0.426±0.33 0.205±0.06 1.300±0.74

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