C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138152-ENSG00000107679 CGP 9606 10:122271306-122442602
GeneTranscriptPositionBiotype
ENSG00000107679 (PLEKHA1)
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 		ENST00000368988 (PLEKHA1-201) 122393105-122432354 protein_coding
ENST00000368989 (PLEKHA1-001) 122374760-122432345 protein_coding
ENST00000368990 (PLEKHA1-002) 122374696-122442602 protein_coding
ENST00000392799 (PLEKHA1-004) 122386609-122430479 protein_coding
ENST00000433307 (PLEKHA1-202) 122393128-122432354 protein_coding
ENST00000463663 (PLEKHA1-009) 122374834-122412976 protein_coding
ENST00000481451 (PLEKHA1-006) 122411771-122425731 retained_intron
ENST00000494222 (PLEKHA1-007) 122374696-122416006 processed_transcript
ENSG00000138152 (BTBD16)
BTB (POZ) domain containing 16 		ENST00000260723 (BTBD16-001) 122271306-122338162 protein_coding
ENST00000495370 (BTBD16-003) 122331967-122336622 processed_transcript
ENST00000507495 (BTBD16-002) 122291081-122291690 processed_transcript
ENSG00000265442 (MIR3941)
microRNA 3941 		ENST00000582572 (MIR3941-201) 122416965-122417067 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001BB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040298-ENSMUSG00000040268 CGP 10090 7:130774069-130913312
GeneTranscriptPositionBiotype
ENSMUSG00000040268 (Plekha1)
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 		ENSMUST00000048180 (Plekha1-003) 130865910-130913302 protein_coding
ENSMUST00000075181 (Plekha1-001) 130865898-130912068 protein_coding
ENSMUST00000120441 (Plekha1-002) 130865756-130913312 protein_coding
ENSMUST00000126355 (Plekha1-011) 130904904-130911163 protein_coding
ENSMUST00000135359 (Plekha1-012) 130905304-130910901 retained_intron
ENSMUST00000136963 (Plekha1-009) 130900534-130909676 processed_transcript
ENSMUST00000140153 (Plekha1-006) 130865887-130878153 retained_intron
ENSMUST00000146111 (Plekha1-010) 130902245-130908900 retained_intron
ENSMUST00000148513 (Plekha1-005) 130865885-130894741 retained_intron
ENSMUST00000149029 (Plekha1-008) 130896991-130905426 retained_intron
ENSMUST00000151119 (Plekha1-004) 130865903-130909821 nonsense_mediated_decay
ENSMUST00000154282 (Plekha1-007) 130882352-130885520 retained_intron
ENSMUSG00000040298 (Btbd16)
BTB (POZ) domain containing 16 		ENSMUST00000048453 (Btbd16-201) 130774069-130825897 protein_coding
ENSMUSG00000086108 (Gm5602)
predicted gene 5602 		ENSMUST00000146366 (Gm5602-001) 130861299-130866330 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BB_0001ENSG00000107679ENST00000368988ENST00000368989ENST00000368990ENST00000392799ENST00000433307ENST00000463663ENST00000481451ENST00000494222ENSG00000138152ENST00000260723ENST00000495370ENST00000507495ENSG00000265442ENST00000582572CIL_0001BB_0002ENSMUSG00000040268ENSMUST00000048180ENSMUST00000075181ENSMUST00000120441ENSMUST00000126355ENSMUST00000135359ENSMUST00000136963ENSMUST00000140153ENSMUST00000146111ENSMUST00000148513ENSMUST00000149029ENSMUST00000151119ENSMUST00000154282ENSMUSG00000040298ENSMUST00000048453ENSMUSG00000086108ENSMUST00000146366
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BB_0001ENSG00000107679ENST00000368988ENST00000368989ENST00000368990ENST00000392799ENST00000433307ENST00000481451ENSG00000138152ENST00000260723ENST00000495370ENST00000507495ENSG00000265442ENST00000582572CIL_0001BB_0002ENSMUSG00000040268ENSMUST00000048180ENSMUST00000075181ENSMUST00000120441ENSMUST00000149029ENSMUST00000151119ENSMUSG00000040298ENSMUST00000048453ENSMUSG00000086108ENSMUST00000146366
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107679 ENST00000368988 1.398±0.00 N/A N/A 4.360±0.00 N/A N/A N/A 3.439±0.00 N/A N/A N/A N/A N/A 6.612±2.42
ENST00000368989 5.929±0.00 2.955±0.00 N/A 8.541±3.72 7.216±0.00 7.030±0.00 4.825±1.97 16.380±0.00 2.948±1.80 15.125±0.00 6.267±5.56 4.039±0.77 4.514±1.59 3.945±0.00
ENST00000368990 N/A N/A N/A 0.417±0.00 N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A
ENST00000392799 N/A N/A 1.818±0.00 N/A N/A 2.705±0.00 N/A N/A N/A N/A 0.719±0.00 N/A N/A N/A
ENST00000433307 N/A 1.787±0.00 2.415±0.00 4.303±0.75 2.715±0.00 3.039±0.00 N/A 4.055±0.17 2.493±0.79 3.465±0.00 N/A 8.913±8.02 5.290±0.90 3.082±1.04
ENST00000463663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481451 N/A 0.451±0.00 0.567±0.00 0.529±0.00 0.788±0.00 N/A 0.663±0.00 0.692±0.00 0.662±0.00 N/A 0.128±0.00 1.060±0.76 N/A N/A
ENST00000494222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138152 ENST00000260723 N/A 0.036±0.00 N/A 0.348±0.00 0.111±0.00 0.044±0.00 N/A 0.171±0.10 0.816±0.00 0.050±0.00 0.151±0.00 0.127±0.06 0.095±0.05 6.440±3.09
ENST00000495370 N/A N/A N/A 0.977±0.00 N/A N/A N/A N/A N/A N/A N/A 0.498±0.42 0.055±0.00 N/A
ENST00000507495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A
ENSG00000265442 ENST00000582572 N/A 0.175±0.00 N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A 15.673±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040268 ENSMUST00000048180 N/A N/A 8.700±2.12 13.627±8.48 3.201±0.00 7.384±5.63 N/A N/A 2.759±3.47 N/A 2.695±0.00 6.892±0.00 6.630±3.64 0.542±0.07
ENSMUST00000075181 N/A N/A N/A 9.109±0.00 5.434±0.00 N/A N/A N/A N/A N/A 1.919±0.00 10.779±0.00 10.451±5.32 2.559±0.00
ENSMUST00000120441 2.195±0.00 1.096±0.00 8.671±0.38 21.589±5.58 3.459±0.84 N/A 4.137±0.07 3.696±0.48 2.022±2.57 6.399±1.57 2.491±1.73 4.569±0.92 6.707±0.57 0.948±0.00
ENSMUST00000126355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149029 N/A N/A N/A 13.654±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 25.916±0.00 N/A
ENSMUST00000151119 N/A N/A N/A 21.893±0.00 N/A N/A N/A N/A N/A N/A N/A 5.101±0.00 N/A 0.822±0.00
ENSMUST00000154282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040298 ENSMUST00000048453 0.017±0.01 0.031±0.01 0.015±0.00 0.042±0.05 0.054±0.04 0.029±0.01 0.066±0.01 0.039±0.03 0.012±0.01 0.019±0.01 0.012±0.00 0.347±0.13 0.160±0.09 13.837±3.37
ENSMUSG00000086108 ENSMUST00000146366 0.206±0.08 0.296±0.12 0.206±0.02 0.190±0.07 0.159±0.09 0.678±0.13 0.210±0.04 0.506±0.06 0.119±0.06 0.401±0.10 0.061±0.02 0.261±0.09 0.222±0.07 0.112±0.06

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